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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY124832; SV 1; linear; mRNA; STD; PLN; 1305 BP.
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AC   AY124832;
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DT   08-JUL-2002 (Rel. 72, Created)
DT   08-JUL-2002 (Rel. 72, Last updated, Version 1)
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DE   Arabidopsis thaliana AT5g15050/F2G14_170 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1305
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1305
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (17-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Kim,C.J.,
CC   Chen,H., Cheuk,R., Shinn,P., Banh,J., Bowser,L., Chang,E.,
CC   Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C.,
CC   Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W.,  Theologis,A.,
CC   and Ecker,J.R.
CC   Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1305
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /mol_type="mRNA"
FT                   /clone="U14620"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1305
FT                   /codon_start=1
FT                   /product="AT5g15050/F2G14_170"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q9LFQ0"
FT                   /db_xref="InterPro:IPR003406"
FT                   /db_xref="UniProtKB/TrEMBL:Q9LFQ0"
FT                   /protein_id="AAM70541.1"
FT                   /translation="MKKLKSYYMQVRNQQQSLDRKWILPLAIGSICSLFLLLLTNLASS
FT                   SGQTRLIPFSVYGFRSSVFVESKINPVSVSLTVSVSPPPPPRLAYLISGSSGDGQMLKR
FT                   TLMALYHPNNQYVVHLDRESSPEERLDLSGFVANHTLFQRFQNVRMIVKANFVTYRGPT
FT                   MVANTLHAAAILLREGGDWDWFINLSASDYPLVTQDDLLHTFSYLPRDLNFIDHTSNIG
FT                   WKESHRAKPIIIDPGLYMSKKADVFWVSQKRSMPTAFKLFTGSAWMMLSRPFVDYFIWG
FT                   WDNLPRIVLMYYANFLSSPEGYFHTVICNAREFTNTTVNSDLHFISWDNPPKQHPHHLT
FT                   LDDFQRMVDSNAPFARKFRRDEPVLDKIDSELLFRSHGMVTPGGWCIGTRENGSDPCAV
FT                   IGDTSVIKPGLGAKRIEKLITYLLSTENFRPRQCR"
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SQ   Sequence 1305 BP; 329 A; 287 C; 277 G; 412 T; 0 other;
     atgaagaaat tgaaaagcta ttacatgcaa gttcgtaacc agcaacaatc tcttgaccga        60
     aaatggattc ttccattagc aatcggatcc atttgttctc tctttctctt gttgctaacg       120
     aacttagctt cttcttctgg tcaaactcgt ttgattccat tttcagttta cggatttaga       180
     tcctccgtct tcgtcgaatc caagataaat ccagtatccg tctcactcac cgtctccgtc       240
     tctcctcctc cgccgccacg tctcgcttat ctaatctccg gctcctctgg tgacggtcag       300
     atgctgaaac gaactctaat ggcgctttat catcccaaca accagtacgt tgttcatctc       360
     gatcgggaat cttcaccgga ggaacgattg gatctcagtg gttttgtggc gaatcatact       420
     ctgtttcaga gatttcaaaa tgttcggatg attgttaagg ctaatttcgt tacgtatcgt       480
     ggtccaacta tggtggctaa tacacttcac gctgcagcga ttttgcttcg tgaaggtggt       540
     gattgggatt ggttcatcaa tctcagtgcc tctgattatc ctctcgtaac acaagatgat       600
     ctgttgcata cgttttcgta tcttcctcga gatctcaatt tcatcgatca tacaagcaac       660
     attggctgga aagagtctca tagagcaaag cctataatta ttgatcctgg tttgtatatg       720
     tcaaagaaag ctgatgtttt ctgggtttca cagaagagaa gtatgcctac agctttcaaa       780
     ctcttcacag gatctgcgtg gatgatgtta tctagacctt ttgtggatta tttcatatgg       840
     ggatgggata atcttcctcg aattgtgtta atgtattacg caaacttcct ttcatcgcca       900
     gaaggttact tccacactgt gatttgcaat gctcgagagt ttaccaacac aacggttaac       960
     agtgacttac atttcatctc atgggacaat cctccaaagc aacatcctca ccatcttaca      1020
     ttagatgatt tccagagaat ggtggacagt aacgctcctt ttgctaggaa attccgtaga      1080
     gatgagcctg ttctcgataa gattgattcg gaactattgt ttcggagtca cgggatggtc      1140
     actccgggtg gttggtgtat tggtacgagg gaaaacggga gcgatccgtg tgcggtgatt      1200
     ggtgatacgt cggttattaa acctggtctt ggagctaaac ggatcgagaa actcataact      1260
     tatttgttat ctactgagaa tttcagacca cggcaatgcc ggtaa                      1305
//
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