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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY124807; SV 1; linear; mRNA; STD; PLN; 1425 BP.
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AC   AY124807;
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DT   08-JUL-2002 (Rel. 72, Created)
DT   08-JUL-2002 (Rel. 72, Last updated, Version 1)
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DE   Arabidopsis thaliana At1g08660/F22O13_14 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1425
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1425
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (17-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
CC   Chen,H., Kim,C.J., Shinn,P., Banh,J. Bowser,L., Chan,M.M.,
CC   Chang,E., Dale,J.M., Deng, J.M., Goldsmith,A.D., Jones,T.,
CC   Karlin-Neumann,G., Lam,B., Lee,J.M., Lin,J., Miranda,M., Nguyen,M.,
CC   Onodera,C.S., Palm,C.J., Quach,H.L., Southwick,A., Tang,C.C.,
CC   Toriumi,M., Wu,H.C., Yamada,K., Yamamura, Y., Yu,G., Davis,R.W.,
CC   Theologis,A., and Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1425
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="U21103"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1425
FT                   /codon_start=1
FT                   /product="At1g08660/F22O13_14"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q8VZJ0"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="UniProtKB/TrEMBL:Q8VZJ0"
FT                   /protein_id="AAM70516.1"
FT                   /translation="MRSHQAGRKLPLLQLLGCVAVFSVFVFTIQSSFFADNNRKLDLQP
FT                   EDIQILSDFQSSVQQCVANRGLGLSAHIIDHCNLILKFPEGTNSTWYNAQFKVFEALEF
FT                   KYNVCEAVLLWEQYRNMTTVLTREYLDVRPDGWLDYAAMRIAQLGADKCYNRTLCEEHL
FT                   NVILPAKPPFHPRQFHKCAVVGNSGDLLKTEFGEEIDSHDAVFRDNEAPVNEKYAKYVG
FT                   VKRDFRLVVRGAARNMIKILNGSDNEVLIIKSVTHRDFNEMIKRIPNPVYLFQGIVLRR
FT                   GAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSTPRKGHNPLQGRAYYQLLEC
FT                   LGVIRIHSPMRSERKEDWSSVPSREMISRAHTAALRLQRSQQPTSSKRDGSGQFGNCKV
FT                   WGDADPTKGPVSGSPDMSETRKKSNYKKWEVMPFRSLRKEARDHYIQMKGVSQYKMDGN
FT                   KLDDLVCVRHPLKLDT"
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SQ   Sequence 1425 BP; 415 A; 290 C; 345 G; 375 T; 0 other;
     atgagatctc accaagctgg ccgcaaactt ccgcttcttc aacttctcgg ctgcgtcgct        60
     gttttctccg ttttcgtttt caccatccaa tcttccttct tcgcagataa taatcgtaaa       120
     ctagatcttc agccggaaga tatccagatc ttgtcagatt ttcagtccag cgttcaacag       180
     tgcgtggcta acagagggct tggactctct gcccatatta tcgatcactg taatcttatc       240
     ctcaagttcc ctgaaggcac taacagtact tggtacaatg cacaatttaa agtttttgaa       300
     gcattggagt tcaagtataa tgtttgtgag gcagttctct tatgggagca gtaccgcaat       360
     atgactacag tattgacaag agaatacctc gatgtacgcc ctgatgggtg gttggactac       420
     gcagctatga gaattgcaca gttgggagct gataagtgtt ataatcgtac attgtgtgaa       480
     gagcatctta atgtgattct tccagcgaag cctccttttc acccacggca gtttcataaa       540
     tgcgctgttg ttggaaattc tggagatctg ttaaaaacag agttcggaga agagattgac       600
     agtcatgatg ctgtatttcg agacaatgaa gctcctgtca atgagaagta tgccaagtac       660
     gtaggagtga aaagggattt ccgactagtt gttcgtggtg cagctcgtaa catgattaag       720
     attctcaatg ggtctgacaa tgaagtgctt ataataaaaa gtgtgaccca ccgagacttc       780
     aatgaaatga taaagcgtat accaaaccct gtttatcttt tccaaggaat tgtcctacgc       840
     agaggtgcca aaggaaccgg gatgaaatcc attgaactag cattgtccat gtgcgatatt       900
     gttgacatat atggtttcac tgttgatcct ggatacacag agtggacgcg ttacttttcc       960
     acgccaagga aagggcacaa cccacttcaa ggaagggcat actaccaact tctagagtgt      1020
     cttggtgtaa tacggatcca ttctcccatg agatccgaga gaaaggagga ctggtcaagt      1080
     gtgccaagtc gtgaaatgat aagcagagct cacacagctg ccttacgcct acaaaggagc      1140
     caacagccaa ctagttcgaa gagggatggg tcaggacaat tcggtaattg caaggtgtgg      1200
     ggcgatgcag accctacaaa aggacctgtc tcgggatctc cggacatgag tgagaccagg      1260
     aagaagtcaa attacaagaa atgggaagtg atgccgttta ggagcttaag aaaggaagct      1320
     agggatcact atatccaaat gaaaggcgtg tcacagtata agatggatgg aaataagctg      1380
     gacgatctgg tttgcgtgag gcatccactg aaattagata cgtaa                      1425
//
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