EBI Dbfetch

ID   AY123981; SV 1; linear; mRNA; STD; PLN; 1375 BP.
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AC   AY123981;
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DT   08-JUL-2002 (Rel. 72, Created)
DT   08-JUL-2002 (Rel. 72, Last updated, Version 1)
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DE   Arabidopsis thaliana At1g57590/T8L23_6 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1375
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis cDNA clones";
RL   Unpublished.
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RN   [2]
RP   1-1375
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (19-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Cheuk,R., Chen,H.,
CC   Kim,C.J., Meyers,M.C., Shinn,P., Banh,J. Bowser,L., Chan,M.M.,
CC   Chang,E., Dale,J.M., Deng, J.M., Goldsmith,A.D., Jones,T.,
CC   Karlin-Neumann,G., Lam,B., Lee,J.M., Lin,J., Miranda,M., Nguyen,M.,
CC   Onodera,C.S., Palm,C.J., Quach,H.L., Southwick,A., Tang,C.C.,
CC   Toriumi,M., Wu,H.C., Yamada,K., Yamamura, Y., Yu,G., Davis,R.W.,
CC   Theologis,A., and Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1375
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL09-88-E15(R22050)"
FT                   /note="ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   5'UTR           1..4
FT   CDS             5..1276
FT                   /codon_start=1
FT                   /product="At1g57590/T8L23_6"
FT                   /note="putative pectinacetylesterase precursor"
FT                   /db_xref="InterPro:IPR004963"
FT                   /db_xref="UniProtKB/TrEMBL:Q8L7Z5"
FT                   /protein_id="AAM74495.1"
FT                   /translation="MIKKCKMKKLLWSWIILFNIHVNGMMMEFDEMEWFTVFNGTKVFQ
FT                   TQNDVFSEAKFPMVGLTLIQSAAAKGAVCLDGSLPGYHLHRGFGSGANNWLVQLEGGGW
FT                   CDTIRNCVYRKTTRRGSSSYMEKEIPFTGILSDKAADNPDFYNWNRVKVRYCDGGSFSG
FT                   DSENKAAQLQFRGKRIWLAAMEDLMAKGMRQAKQALLSGCSAGGLAVILRCDDFGKLFP
FT                   PSTRVKCLSDAGFFLGAIDVSGGRSLRRLYAGVVRLQNLQTNLPQYCVNRLNPTSCFFP
FT                   QNLINQVKTPLFILNAAYDSWQIQESLAPKSADPSGSWNDCRLNYAKCSASQIQFLQGF
FT                   RTRMVNLVKGFAMPSKNGVFLNSCFAHCQTERHDTWFAQNSPAIKNKGIAVAVGDWYFE
FT                   RGGAKLIDCAYPCDKTCHNLVFRR"
FT   3'UTR           1277..1375
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SQ   Sequence 1375 BP; 385 A; 242 C; 323 G; 425 T; 0 other;
     atccatgatc aagaagtgta aaatgaagaa gcttctatgg agttggatca ttctcttcaa        60
     catccatgta aatggaatga tgatggagtt tgatgaaatg gagtggttca cagttttcaa       120
     tggaacaaaa gtgtttcaga ctcaaaatga tgttttttct gaagctaagt ttcctatggt       180
     tggactcact ctgattcaat ctgctgctgc taaaggagct gtgtgtttgg atggaagtct       240
     tcccggatac catttgcatc gcgggtttgg ttccggagcg aacaattggc tcgttcaatt       300
     agagggaggt ggatggtgtg ataccattag aaattgtgtt taccgtaaaa ccactcgtcg       360
     tggatcttct tcatatatgg agaaagagat accatttacc ggcattctaa gtgataaagc       420
     cgcggataat ccagactttt ataactggaa tagagtaaaa gttcggtatt gtgacggtgg       480
     atcgtttagc ggggatagcg aaaataaggc tgcacaactt cagtttagag gaaagagaat       540
     ttggttagct gctatggaag atttgatggc aaaaggtatg cgtcaagcta agcaggctct       600
     gctctctgga tgttctgcag gaggtcttgc ggtgatttta cgatgtgatg attttgggaa       660
     attgtttcct ccttccacca gagtgaaatg tttgagtgat gctggtttct tccttggtgc       720
     catcgatgtg tctggaggtc gatctcttag acgattatac gccggtgtgg tcagattaca       780
     gaatctgcaa accaaccttc ctcagtattg tgtaaaccgt cttaatccca cttcgtgttt       840
     tttcccacaa aacctaatca accaagtcaa gactccactt tttattctta atgctgcata       900
     tgattcttgg cagattcaag agagtttagc tccaaaatct gcagatccaa gtggaagttg       960
     gaatgattgt agacttaact acgccaagtg tagtgcatct cagatccaat tcttgcaagg      1020
     ttttaggacg cgtatggtga atttggtaaa aggtttcgcg atgccaagta agaacggtgt      1080
     gttcctcaat tcgtgctttg ctcattgcca aacagagagg catgacactt ggttcgccca      1140
     aaactctcca gctattaaga acaagggtat tgcagtagct gtgggagatt ggtatttcga      1200
     aagaggagga gcaaagctca tagactgtgc ttatccttgt gacaagactt gtcacaattt      1260
     ggtctttaga agataaaact agtttttctt tggtatcaca atgtattttt ttaagaagca      1320
     tccatttatt tattcaggca acacaatgaa atgaaataaa acccatttga taact           1375
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