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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY113284; SV 1; linear; mRNA; STD; INV; 655 BP.
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AC   AY113284;
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DT   27-MAY-2002 (Rel. 71, Created)
DT   27-MAY-2002 (Rel. 71, Last updated, Version 1)
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DE   Drosophila melanogaster AT18611 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-655
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (16-MAY-2002) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..655
FT                   /organism="Drosophila melanogaster"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   misc_feature    11..655
FT                   /note="sim4 alignment with AE003791 (57A3-57B3)"
FT   CDS             79..453
FT                   /codon_start=1
FT                   /product="AT18611p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0050148"
FT                   /db_xref="UniProtKB/TrEMBL:Q8MKJ9"
FT                   /protein_id="AAM29289.1"
FT                   /translation="MPTLPLCLLLLVLAIAFGHAYEAPEAQVRVFYPRGFEVSIPDAEG
FT                   ISLFAFHGKLNEEFDGLEAGQWSRDIPKAKRGRWTFRDHKTKLNHGDTLYFWTYVIYNG
FT                   LGYRQDEGAHVVTSYDNPHK"
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SQ   Sequence 655 BP; 172 A; 155 C; 156 G; 172 T; 0 other;
     gtttgaaggc aggtccgctc atcgagttta gttctgttcg gaggtccgat accgcaacac        60
     gttccatttc gattcgtgat gcctacactt ccgctgtgcc tgctgctcct ggtgttggcg       120
     attgcctttg gccacgccta cgaggcacct gaggcacagg tgcgcgtgtt ctatccccgg       180
     ggattcgagg tctccattcc ggatgcggag ggtatttcac tgtttgcctt ccatggcaag       240
     ctaaacgagg agttcgacgg cctggaggcg ggacaatggt ccagggatat tccgaaagcc       300
     aagcggggac gttggacatt ccgagatcac aagacaaagc tcaaccatgg agataccctg       360
     tacttttgga cctacgtcat ttacaacggg ctgggctata gacaggatga aggtgctcat       420
     gtggtcacca gttacgacaa tccacataaa tagtgtcatc tttcaattat gggatcgtgg       480
     acgagcttaa agctcatctt gaacctttgt ttatggagcg tactttccat gctcatccgc       540
     tcttttggct cacagctaat ctttttgctt gctacacaaa gaacaatgcg ttcacaaata       600
     ataataataa ttcaccaaat taaagtgtta tcaaaacaaa aaaaaaaaaa aaaaa            655
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