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EBI DbfetchID AY102168; SV 1; linear; genomic DNA; STD; PLN; 3729 BP. XX AC AY102168; XX DT 02-DEC-2003 (Rel. 78, Created) DT 20-MAY-2007 (Rel. 91, Last updated, Version 4) XX DE Solanum lycopersicum mannan endo-1,4-beta-mannanase precursor (MAN2') gene, DE complete cds. XX KW . XX OS Solanum lycopersicum OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; OC Lycopersicon. XX RN [1] RP 1-3729 RX DOI; 10.1104/pp.103.035998 RX PUBMED; 14976239. RA Filichkin S.A., Leonard J.M., Monteros A., Liu P.P., Nonogaki H.; RT "A novel endo-beta-mannanase gene in tomato LeMAN5 is associated with RT anther and pollen development"; RL Plant Physiol. 134(3):1080-1087(2004). XX RN [2] RP 1-3729 RA Filichkin S., Nonogaki H.; RT ; RL Submitted (07-MAY-2002) to the EMBL/GenBank/DDBJ databases. RL Crop and Soil Sciences, Oregon State University, CSS Bldg., Corvallis, OR RL 97331, USA XX FH Key Location/Qualifiers FH FT source 1..3729 FT /organism="Solanum lycopersicum" FT /cultivar="Moneymaker" FT /mol_type="genomic DNA" FT /db_xref="taxon:4081" FT gene <796..>3659 FT /gene="MAN2'" FT /note="LeMAN2'" FT mRNA join(<796..1149,1412..1606,1691..1813,2046..2248, FT 2981..>3350) FT /gene="MAN2'" FT /product="mannan endo-1,4-beta-mannanase precursor" FT CDS join(796..1149,1412..1606,1691..1813,2046..2248,2981..3350) FT /codon_start=1 FT /gene="MAN2'" FT /product="mannan endo-1,4-beta-mannanase precursor" FT /function="random hydrolysis of 1,4-beta-D-mannosidic FT linkages in mannans, galactomannans, glucomannans, and FT galactoglucomannans" FT /EC_number="3.2.1.78" FT /note="similar to Lycopersicon esculentum product encoded FT by GenBank Accession Number AF184238" FT /db_xref="GOA:Q6YM50" FT /db_xref="InterPro:IPR001547" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/Swiss-Prot:Q6YM50" FT /protein_id="AAM26920.1" FT /translation="MAYFQRLISCIFVLFLLSLAFACEARVLLDENNANDQGFVRVNGA FT HFELNGSPFLFNGFNSYWLMHVAAEPSERYKVSEVLREASSAGLSVCRTWAFSDGGDRA FT LQISPGVYDERVFQGLDFVISEAKKYGIRLILSFVNNYNDFGGKAQYVQWARNAGAQIN FT GDDDFYTNYITKNYYKNHIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNT FT LNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEID FT FATIHAYTDQWLSGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQ FT NIRDTFMSTIYRNIYSLAKDGGTMGGSLIWQLVAQGMENYEDGYCIELGKNPSTAGIIT FT SQSHAMTALAHLVKI" FT sig_peptide 796..861 FT /gene="MAN2'" FT polyA_signal 3654..3659 FT /gene="MAN2'" XX SQ Sequence 3729 BP; 1287 A; 564 C; 554 G; 1324 T; 0 other; gccctttcga tcccatagac tagagataac gtacatctag agttttctta aagttttatg 60 caaataagtc taataacggt ataaactagc tagaatatcc aacacgaaat tctcattgca 120 attaatagaa acactaaatt taaaatctat atgcataaat taatttcttt cttaaattgg 180 tgtctaatgt ctgcattaaa gtttcgctta aatttaaatg tctacaaagc tcgtttggcg 240 ctcccaacat actcagtact caaactcgaa atatctgatt aaggatgaag taattctatc 300 actacaccac gatcgtgttc gtgttggtac atggattagg ttctccaact aacttttcta 360 actgcaaaaa cttttgagta cacttcttca tatatgtttt tgatcatcat taaattttag 420 tactcatcca ataactaaca taaaaataat gttttcatct tttccactag cttctttaat 480 ttcttaaaaa tagaagcaat tctttttctc ttccgaattc tctaaactga attttttgct 540 ttatacaact gaactaaata accttatctt ctatcaactt cccataaagt actctttagc 600 tttcataaaa tatattccag ccaaatttag taaaccacca ccacctttaa tttaatttgt 660 aacttattaa aatgaaatat tactattttt agcaagtttc attatacacc agtcactata 720 aatattggcc ccaacaagtg accaatacac aagaaacaca tacgtatata catgcatttg 780 tctatcaaaa taataatggc ttattttcaa agactaatta gttgtatttt tgtgcttttc 840 cttttgtcct tagcttttgc atgtgaagct agggttttac ttgatgaaaa taatgcaaat 900 gatcaagggt ttgttagagt caatggtgca cattttgaac tcaatggatc accttttcta 960 ttcaatggtt tcaactctta ctggctaatg catgttgctg ctgagcctag tgagaggtac 1020 aaggtctccg aggtccttcg cgaagcatct tctgcagggc tttctgtatg ccgtacttgg 1080 gcttttagtg atggaggtga tagggcatta caaatttcac ctggtgttta tgatgaacgt 1140 gtttttcagg tagtacattt gtttgtgtca tttcatatga cattgactaa cacctttcta 1200 tatttgaaaa ctctttatac taacattgaa cttctaccta taatgttata tgtttttaaa 1260 atgacatttt aacactacaa gtttatcttt ttcaacttat gaccacaagt acttttaatg 1320 aaggtacttt tgatacgtaa aagaatccat ttatttcttg aactttgtat acagtcaaac 1380 aacatattac tacattatgt acattatgta gggtttggat tttgttatat cggaggctaa 1440 gaagtatgga attcgattaa tcttgagctt tgtaaacaac tacaacgatt ttggagggaa 1500 agctcaatat gttcaatggg cgcgaaatgc aggagctcag ataaatggag acgatgattt 1560 ctacactaat tatattacca aaaattatta caagaatcac attaaggtaa caaaaaccta 1620 gcactcatta attgattaac acatgctaat gtttaatttt aattattaag tacaattatt 1680 gttaatgcag aaagttgtta caaggttcaa taccattact ggaatgacat ataaagatga 1740 ttcaactatc atggcatggg aactcatgaa tgagcctagg aaccaagctg attattcagg 1800 aaatactctt aacgtacgta cgtctgaatt aaatcatgaa ttgatttctc aaatgctcac 1860 tcgatcaact gattaattat aagtactagt tattatttca aaaagtaact attatttgaa 1920 tagaatgatc atatgagaaa tcaatcctaa ataaaagaga ttctttttat atttctcagt 1980 tactaagtac attttaaatt caataaattt gcataattga tgtttatatt ttgatattat 2040 tttaggcatg ggttcaagaa atggcaagtt ttgtgaaatc acttgataac aaacatttgc 2100 tggaaatagg aatggaagga ttttatggtg attcagtgcc agaaaggaag tcaattaatc 2160 ctggctatca agttggaaca gattttatta gtaaccattt gatcaaagag attgattttg 2220 ccactattca tgcatacact gaccaatggt atattatgtt attctttctt catagttcac 2280 atacttcact cttatctttg gttcgaatcc tagatttgaa atttttttat gagtcttgca 2340 gtacgccctc cggatttaat tgggctaaaa aaacactaaa atcatgatat tgatatattc 2400 cctccgtccc tatttagttg tccactttaa aaatgacaca cataataata taacaatagt 2460 taacatagtg aagttacaat tttatcctta ttaattatgg tttcaaattt caagattttt 2520 aaatgagggt ataatagaat tttttttgat cctttcttga tttgtcaaaa ttgacaaata 2580 aataggaaca actaaaagat gaaatatgga caagcgaata ggaacataga gtattattta 2640 cacgacatca aatcaacttt attcaaaatt taatatttaa tgaattctgt ttataaggtt 2700 ttcaaatact gaacataatg agttttcgaa attgtacgtc caaaatttta tgattcaaga 2760 attcattcca cctttggact aacaaaagta tcacgtatgg cgccactttt tataatataa 2820 gaaacccgtt aatgtcaaaa taaataaaag ttcaatatat ataacatcac ccatatgtta 2880 cgttatctag tgacataata cctagttatc cttttaactg tttttctttt aaaaaaatta 2940 taacaagaat taattaaaat tttttaatgc tgaattatag gttatctggt caaagtgatg 3000 atgctcaaat gatcttcatg caaaaatgga tgacaagtca ttggcaagac gcaaaaaaca 3060 tacttaaaaa accactggtt ctagctgaat ttggcaaatc aagtagagat ccaggatata 3120 atcaaaatat acgcgataca tttatgagca cgatatatag aaatatttat agtttagcaa 3180 aagatggagg aacgatggga ggaagtttaa tatggcagct cgttgcacaa ggcatggaaa 3240 attatgaaga tggttattgt attgaattgg gaaaaaatcc atccactgct ggaattatta 3300 caagtcagtc tcatgccatg acagctttgg ctcatttggt taagatttag gactaatttt 3360 ataagtaata cattagagga catggaagaa aataagtata ctttagtagt tccatcacct 3420 tttttttttt gggtaaatta tgaaatatgt ctttgtaata attggctaag tatatgtaac 3480 tttcaaataa tcaattgaaa tgtatgtttt aatcctttta tatatatgta aaatttatat 3540 attttcaact atttttagag ctatatcatt taagtggcta ttgaggaaaa taattagttc 3600 tatgagagat tctaggtact cacgttacta taacaaaaat agtttttagt agcaataaat 3660 atttatatta acaaagagga ttaaagtctt atcgacattt gttaattgtc actagattcg 3720 ctatagaca 3729 // |
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