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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY102148; SV 1; linear; mRNA; STD; PLN; 1287 BP.
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AC   AY102148;
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DT   25-MAY-2002 (Rel. 71, Created)
DT   29-MAY-2002 (Rel. 71, Last updated, Version 2)
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DE   Arabidopsis thaliana At1g75110/F9E10_4 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1287
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1287
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (07-MAY-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Shinn,P.,
CC   Chen,H., Cheuk,R., Kim,C.J., Banh,J., Bowser,L., Chang,E.,
CC   Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C.,
CC   Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W.,  Theologis,A.,
CC   and Ecker,J.R.
CC   Shinn,P. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1287
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="U12761"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1287
FT                   /codon_start=1
FT                   /product="At1g75110/F9E10_4"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q9C9Q5"
FT                   /db_xref="InterPro:IPR003388"
FT                   /db_xref="UniProtKB/TrEMBL:Q9C9Q5"
FT                   /protein_id="AAM26715.1"
FT                   /translation="MAGRRDRIQQLRGSRIAIAIFVGILIGCVCSVLFPNGFFNSGSSL
FT                   IANEERISKSTSTDGLASCESSERVKMLKSDFSIISVKNAELRKQVRELTEKVRLAEQE
FT                   TENARKQVLVLGSEIKAGPFGTVKSLRTNPTVVPDESVNPRLAKLLEKVAVNKEIIVVL
FT                   ANSNVKPMLELQIASVKRVGIQNYLIVALDDSMESFCESKEVVFYKRDPDKAVDMVGKS
FT                   GGNHAVSGLKFRVLREFLQLGYSVLLSDVDIVFLQNPFSHLHRDSDVESMSDGHDNNTA
FT                   YGFNDVFDEPSMGWARYAHTMRIWVFNSGFFYLRPTIPSIDLLDRVADTLSKSEAWDQA
FT                   VFNEQLFYPSHPGYTGLHASKRVMDMYEFMNSKVLFKTVRKNQELKKLKPVIVHLNYHP
FT                   DKLERMHAVVEFYVNGKQDALDSFPDGSD"
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SQ   Sequence 1287 BP; 370 A; 244 C; 317 G; 356 T; 0 other;
     atggcgggtc gcagagacag gatccaacag ctccgtggat ctcgaattgc gattgccatc        60
     tttgtcggaa ttcttatcgg ctgtgtctgt tccgtcttgt tcccgaacgg cttctttaac       120
     tcgggatcat ccttgattgc taacgaagaa cgcatttcga aatcaacctc tacggatgga       180
     ttggcttcat gtgaatcatc tgaacgagtc aaaatgctca aatcagactt ttcaattatc       240
     tcggtaaaga acgcagagtt aaggaagcag gtaagagaac taacggagaa ggtacggttg       300
     gcggaacagg aaacagagaa tgcaaggaaa caagtcttag ttttgggatc agagataaag       360
     gcagggcctt ttggtactgt caagagtctg agaactaatc caactgttgt tcctgatgag       420
     tctgttaacc cgagattagc taagctttta gagaaagtag ctgtcaataa agagatcatt       480
     gtggttcttg caaattcaaa tgtgaaacca atgttggagt tgcagattgc tagtgtaaag       540
     agagttggta ttcaaaacta cctcattgtc gcgttggatg attccatgga aagtttctgc       600
     gaatcgaagg aggttgtgtt ttacaagcga gatccagata aagcagtgga catggttgga       660
     aaaagcggag gtaatcacgc tgtttccgga ctgaagttcc gcgtcttaag agagttcttg       720
     cagcttggtt acagtgttct tctatcggat gtggacattg tcttcttgca gaatcctttt       780
     agtcatttac acagagactc tgatgttgag tcaatgagtg atggtcacga caataacacg       840
     gcttatggct tcaacgatgt gtttgatgaa ccatcaatgg gatgggctag gtatgcacac       900
     acaatgagga tatgggtttt caattcaggg tttttctatc taagaccaac tattccttca       960
     atagacctac tcgatcgtgt ggcagataca ctctctaagt cagaggcatg ggaccaagcg      1020
     gttttcaacg agcaactctt ttacccttcg catccagggt acactggctt acacgcttcc      1080
     aagagagtca tggatatgta cgagttcatg aacagtaagg tactcttcaa aacagtgaga      1140
     aagaatcaag aactgaagaa gttgaagcca gtgattgtgc atctcaatta ccatccagat      1200
     aaactcgaac gaatgcacgc tgtggtagag ttctacgtta atggcaaaca agatgcgttg      1260
     gatagctttc ccgatggttc agattga                                          1287
//
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