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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY102127; SV 1; linear; mRNA; STD; PLN; 1275 BP.
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AC   AY102127;
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DT   25-MAY-2002 (Rel. 71, Created)
DT   29-MAY-2002 (Rel. 71, Last updated, Version 2)
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DE   Arabidopsis thaliana AT3g15350/K7L4_15 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1275
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1275
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (07-MAY-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Shinn,P.,
CC   Chen,H., Cheuk,R., Kim,C.J., Banh,J., Bowser,L., Chang,E.,
CC   Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C.,
CC   Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W.,  Theologis,A.,
CC   and Ecker,J.R.
CC   Shinn,P. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1275
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /mol_type="mRNA"
FT                   /clone="U21626"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1275
FT                   /codon_start=1
FT                   /product="AT3g15350/K7L4_15"
FT                   /note="glycosylation enzyme protein"
FT                   /db_xref="GOA:Q9LE60"
FT                   /db_xref="InterPro:IPR003406"
FT                   /db_xref="UniProtKB/TrEMBL:Q9LE60"
FT                   /protein_id="AAM26694.1"
FT                   /translation="MGYVNVEKRWVFPLVITSLVCVFLLATSFNMGLVSSLRTINGIFS
FT                   IIPSRLVKNQTRLDFAESKVARQTRVLPHEDKLPRFAYLVSGSKGDVEKLWRTLRAVYH
FT                   PRNQYVVHLDLESPVNERLELASRINNDPMYSKTGNVYMITKANLVTYKGPTMVANTLH
FT                   ACAVLLKRNANWDWFINLSASDYPLVTQDDLLHTFSTLDRNLNFIEHTSQLGWKEEKRA
FT                   QPLMIDPGLYLLNKSDIYWVTPRRSLPTAFKLFTGSAWMALSRPFVEYCIWGWDNLPRT
FT                   LLMYYTNFVSSPEGYFQTVICNVPEFAKTAVNHDLHYISWDNPPQQHPHVLSLNDTMPM
FT                   IWSGAAFARKFRRDDEVLNKIDKELLKRRNDKDSFTPGGWCSGKPKCSRVGNVAKIVPS
FT                   FGAQRLQGLVTRLVNEANTGVSQCK"
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SQ   Sequence 1275 BP; 356 A; 278 C; 285 G; 356 T; 0 other;
     atggggtatg taaacgtgga gaagagatgg gtttttcctc ttgtcatcac atctctcgtc        60
     tgcgttttcc ttcttgcaac ttctttcaac atgggactag tctcttccct ccgaacaatc       120
     aacgggattt tctccatcat accttcccgt ctcgtcaaga accaaacgag acttgatttt       180
     gcagagtcta aagttgctag acaaacccgt gttttgcctc atgaagacaa gcttccccgt       240
     tttgcatacc ttgtttccgg gtctaaaggg gatgtagaaa agctttggag aacacttaga       300
     gcagtgtacc atccaagaaa ccagtatgtt gttcacttgg atcttgaatc acctgtgaat       360
     gagagattag agctggcctc tcggattaat aacgatccta tgtactctaa aaccgggaat       420
     gtatatatga taaccaaggc taaccttgtg acatataaag gaccaacgat ggtggcaaat       480
     actcttcacg cttgtgctgt tcttctcaag agaaatgcga actgggattg gtttattaac       540
     cttagtgctt cagattatcc tctggtgacc caagatgatc tgcttcatac gttttcaaca       600
     ttggaccgga acctcaactt tatcgaacac acaagtcaac tgggatggaa agaggagaag       660
     cgagcacagc cattaatgat tgatcctgga ctctacttgt tgaacaaatc tgatatttac       720
     tgggtcacac ctcgccgaag tttgccaact gcctttaagt tattcactgg atcagcttgg       780
     atggctctat cacgcccgtt tgtagagtat tgcatatggg gatgggacaa tttaccacga       840
     actctcctaa tgtattacac caacttcgtt tcatcgcccg aaggttactt ccagaccgtg       900
     atttgcaacg tgcctgagtt tgcaaaaact gcagtaaacc atgacctaca ctacatttcc       960
     tgggacaatc cgccgcagca gcacccacac gtgttgtcac tcaacgacac aatgccgatg      1020
     atatggagcg gtgctgcgtt tgctaggaaa ttcagaagag atgatgaagt acttaataag      1080
     atcgataagg aattacttaa acggaggaat gataaagata gttttactcc tggtggatgg      1140
     tgcagtggga aaccaaaatg ctccagggtc ggtaatgtgg ctaagattgt tcctagcttt      1200
     ggagctcaga ggcttcaagg acttgtgacc aggttagtca acgaagctaa tacaggagtt      1260
     agtcagtgta aatag                                                       1275
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