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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY099538; SV 1; linear; genomic DNA; STD; PLN; 1342 BP.
XX
AC   AY099538;
XX
DT   01-MAY-2003 (Rel. 75, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Ipomoea grandifolia isolate PI561550 beta-amylase gene, partial cds.
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KW   .
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OS   Ipomoea grandifolia
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea.
XX
RN   [1]
RP   1-1342
RX   DOI; 10.1016/S1055-7903(03)00249-5
RX   PUBMED; 15012943.
RA   Rajapakse S., Nilmalgoda S.D., Molnar M., Ballard R.E., Austin D.F.,
RA   Bohac J.R.;
RT   "Phylogenetic relationships of the sweetpotato in Ipomoea series Batatas
RT   (Convolvulaceae) based on nuclear beta-amylase gene sequences";
RL   Mol. Phylogenet. Evol. 30(3):623-632(2004).
XX
RN   [2]
RP   1-1342
RA   Rajapakse S.;
RT   ;
RL   Submitted (24-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, Clemson University, 132 Long Hall, Clemson, SC 29634,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1342
FT                   /organism="Ipomoea grandifolia"
FT                   /isolate="PI561550"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:129204"
FT   mRNA            join(<1..174,1103..>1342)
FT                   /product="beta-amylase"
FT   CDS             join(<1..174,1103..>1342)
FT                   /codon_start=1
FT                   /product="beta-amylase"
FT                   /db_xref="GOA:Q84LT8"
FT                   /db_xref="HSSP:1FA2"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q84LT8"
FT                   /protein_id="AAM47022.1"
FT                   /translation="HAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQP
FT                   AEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKL
FT                   KMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADL"
XX
SQ   Sequence 1342 BP; 405 A; 263 C; 310 G; 364 T; 0 other;
     catgcggcgg agctcaccgc cggattctac aatgtggcgg gaagagacgg ttatcggcct        60
     attgcgagga tgctggcaag gcaccatgcc actctaaact tcacttgcct tgagatgaga       120
     gactccgaac agcctgccga ggccaagagt gctcctcaag aactcgttca acaggtacca       180
     taaccaaaat tctataatac caaaatgaat aaataaaagt agtcctgaaa ctagcatagt       240
     ggttgctcac tttaccttaa gttatgatcg gaagtggggt tgggtttgat tgtattgtgt       300
     tggtgtaatt tgagtactac taatgtagta aatacaccga gatatatgaa tatgcctaag       360
     tatcgtctag gttcacgtat acaagcttag gtaaacgtga cagtgggccg gatgatccca       420
     aacttatagt aggtttgagt aaaagttcaa aaatcactcc tcaaagcatt taatgcgcct       480
     tatatagagg tgagggagga cacatgtcgg gaactcggca tgctagctag acacgtgttt       540
     cacatgtatt tggagaggtc gggggctatg ctgatacgtc cacatgcaag gagatgcctg       600
     acgagtccta ctgtgatgtg acgagtataa tgtaattagt cacgcttgtc ttttagcata       660
     aaatgttgtc ccatcagaat aactggtatg ggcactaagg tcgggagttc ccgaactcag       720
     gacgaattgt gtaatcgata atcataaaag aatgtgttta tccactgact tgggtcagat       780
     cataaccaga tggtgtcaaa tgtggtcggg aaatgtcttt catgaaatac ataatacatg       840
     catgccgagc agatatatgg ttatatgcca gagggatatc tcctattaac aacctaacaa       900
     tcctaacatt gatttttatc aaaagcatag tgcaatatta atattaacaa gaatgatact       960
     acgtataaga tagggacaat ccagtcaagt tggtcaaact attcgcttaa gttcactatg      1020
     tacaatctag ctggtttatt tcctggcagt cttttagtta cttccaacat gctaattaaa      1080
     gttgagttga atgattgtgc aggtgttgag cagcggatgg aaagagtata tcgatgtggc      1140
     aggtgagaat gcactgccaa gatatgatgc cacggcatac aaccaaatgc ttctgaacgt      1200
     caggccaaac ggcgtcaacc ttaacggccc tcccaagctc aagatgtctg gcttgacata      1260
     tctccgtttg tccgacgatc tgttacagac agacaacttc gaactcttca agaaattcgt      1320
     caagaagatg cacgctgatc tg                                               1342
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