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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY099537; SV 1; linear; genomic DNA; STD; PLN; 1331 BP.
XX
AC   AY099537;
XX
DT   01-MAY-2003 (Rel. 75, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Ipomoea cordatotriloba isolate PI518495 beta-amylase gene, partial cds.
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KW   .
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OS   Ipomoea cordatotriloba
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea.
XX
RN   [1]
RP   1-1331
RX   DOI; 10.1016/S1055-7903(03)00249-5
RX   PUBMED; 15012943.
RA   Rajapakse S., Nilmalgoda S.D., Molnar M., Ballard R.E., Austin D.F.,
RA   Bohac J.R.;
RT   "Phylogenetic relationships of the sweetpotato in Ipomoea series Batatas
RT   (Convolvulaceae) based on nuclear beta-amylase gene sequences";
RL   Mol. Phylogenet. Evol. 30(3):623-632(2004).
XX
RN   [2]
RP   1-1331
RA   Rajapakse S.;
RT   ;
RL   Submitted (24-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, Clemson University, 132 Long Hall, Clemson, SC 29634,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1331
FT                   /organism="Ipomoea cordatotriloba"
FT                   /isolate="PI518495"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:35882"
FT   mRNA            join(<1..174,1092..>1331)
FT                   /product="beta-amylase"
FT   CDS             join(<1..174,1092..>1331)
FT                   /codon_start=1
FT                   /product="beta-amylase"
FT                   /db_xref="GOA:Q84LT9"
FT                   /db_xref="HSSP:1FA2"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q84LT9"
FT                   /protein_id="AAM47021.1"
FT                   /translation="HAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQP
FT                   AEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKL
FT                   KMFGLTYLRLSDDLLQTDNFELFKKFVKKMHADL"
XX
SQ   Sequence 1331 BP; 400 A; 258 C; 310 G; 363 T; 0 other;
     catgcggcgg agctcaccgc cggattctac aatgtggcgg gaagagacgg ttatcggcct        60
     attgcgagga tgctggcaag gcaccatgcc actctaaact tcacttgcct ggagatgaga       120
     gactccgaac agcctgccga ggccaagagt gctcctcaag aactcgttca acaggtacca       180
     taaccaaaat tctataatac caaaatgaat aaataaaagt agtcctgaaa ctagcatagt       240
     ggttgctcac tttaccttaa gttatgatcg gaagtggggt tgggtttgat tgtattgtgt       300
     tggtgtaatt tgagtactac taatgtagta aatacaccga gatatatgaa tatgcctaag       360
     tatcgtctag gttcacgtat acaagcttag gtaaacgtga cagtgggccg gatgatccca       420
     aacttatagt aggtttgagt aaaagttcaa aaatcactcc tcaaagcatt taatgcgcct       480
     tatatagagg tgaggggaga cacatgtcgg gaactcggca tgctagctag acacgtgttt       540
     cacatgtatt tggagaggtc aggggctatg ctgatacgtc cacatgcaag gagatgcctg       600
     acgagtccta ctgtgatgtg acgagtataa tgtaattagt cacgcttgtc ttttaacata       660
     aaatgttgtc ccatcagtgg tatgggcatt aaggtcggga gttcccgagc tcagggcgaa       720
     ttgtgtaatc gataatcata aaagaatgtg tttatccact gacttgggtc agatcataac       780
     cagatggtgt caaatgtggt cgggaaatgt ctttcatgaa atacataata catgcatgcc       840
     gagcagatat atggttatat gccagaggga tatctcctat taacaacaac cctaacattg       900
     atttttatca aaagcatagt gcaatattaa tattaacaag aatgatacta catataagat       960
     agggacaatc cagttaagtt ggtcaaacta ttcgcttaag ttcactatgt acaatctagc      1020
     tggtttattt cctggcgatc ttttagttac ttccaacatg ctaattaaag ttgagttgaa      1080
     tgattgtgca ggtgttgagc agcggatgga aagagtatat cgatgtggca ggtgagaatg      1140
     cactgccaag atatgatgcc acggcataca accaaatgct tctgaacgtc aggccaaacg      1200
     gcgtcaacct taacggccct cccaagctca agatgtttgg cttgacatat ctccgtttgt      1260
     ccgacgatct gttacagaca gacaacttcg aactcttcaa gaaattcgtc aagaagatgc      1320
     acgctgatct g                                                           1331
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