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EBI Dbfetch

ID   AY098915; SV 1; linear; mRNA; STD; ROD; 2581 BP.
XX
AC   AY098915;
XX
DT   04-JAN-2003 (Rel. 74, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Rattus norvegicus neuronal tryptophan hydroxylase (Tph) mRNA, complete cds.
XX
KW   .
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
XX
RN   [1]
RP   1-2581
RX   DOI; 10.1126/science.1078197
RX   PUBMED; 12511643.
RA   Walther D.J., Peter J.U., Bashammakh S., Hortnagl H., Voits M., Fink H.,
RA   Bader M.;
RT   "Synthesis of serotonin by a second tryptophan hydroxylase isoform";
RL   Science 299(5603):76-76(2003).
XX
RN   [2]
RP   1-2581
RA   Walther D.J., Peter J.-U., Bader M.;
RT   ;
RL   Submitted (23-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Hypertension Research, Max-Delbrueck-Center for Molecular Medicine,
RL   Robert-Roessle-Strasse 10, Berlin-Buch, Berlin D-13092, Germany
XX
DR   ASTD; TRAN00000020401.
DR   Ensembl-Gn; ENSRNOG00000003880; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000005157; Rattus_norvegicus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2581
FT                   /organism="Rattus norvegicus"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:10116"
FT   CDS             118..1575
FT                   /codon_start=1
FT                   /gene="Tph"
FT                   /product="neuronal tryptophan hydroxylase"
FT                   /note="Ratntph; similar to sequence deposited in GenBank
FT                   Accession Number AY090565"
FT                   /db_xref="GOA:Q8CGU9"
FT                   /db_xref="HSSP:1TOH"
FT                   /db_xref="InterPro:IPR001273"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8CGU9"
FT                   /protein_id="AAM28947.1"
FT                   /translation="MQPAMMMFSSKYWARRGLSLDSAVPEEHQILGGLTQNKATASKSE
FT                   DKRSGKDTSESSKTAVVFSLKNEVGGLVRALRLFQEKHVNMLHIESRRSRRRSSEVEIF
FT                   VDCECGKTEFNELIQLLKFQTTIVTLNPPDNIWTEEEELEDVPWFPRKISELDRCSHRV
FT                   LMYGTELDADHPGFKDNVYRQRRKYFVDVAMGYKYGQPIPRVEYTEEETKTWGVVFREL
FT                   SKLYPTHACREYLKNFPLLTKYCGYREDNVPQLEDVSMFLKERSGFTVRPVAGYLSPRD
FT                   FLAGLAYRVFHCTQYVRHGSDPLYTPEPDTCHELLGHVPLLADPKFAQFSQEIGLASLG
FT                   ASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVKAFDPKT
FT                   TCLQECLITTFQDAYFVSESFEEAKEKMRDFAKSITRPFSVYFNPYTQSIEILKDTRSI
FT                   ENVVQDLRSDLNTVCDALNKMNQYLGI"
XX
SQ   Sequence 2581 BP; 737 A; 590 C; 605 G; 649 T; 0 other;
     cagggttctg gacagcgcct cgagcagcca gctgccgctc accttcctcc tacatctctg        60
     ccaaggctgc ccctctgatc ccccctgctg ctgagaaaga aaattacatc gggatccatg       120
     cagcccgcaa tgatgatgtt ttccagtaaa tactgggcca ggagagggtt gtccttggat       180
     tcagcggtgc cagaagagca tcagatactt ggcggcttaa cacaaaataa ggctaccgct       240
     agcaaaagcg aggacaagag aagcggcaaa gacacttcgg agagcagcaa gactgcggtt       300
     gtgttctccc tgaagaatga agttggcggg ctggtgagag cactgagact cttccaggaa       360
     aaacacgtca acatgctcca tattgaatcc aggaggtccc ggcgaagaag ttctgaagtc       420
     gaaatcttcg tggactgtga atgtggcaaa acagaattca acgagctcat tcagttgctc       480
     aagtttcaga ccaccattgt gacgctgaat ccacctgaca acatttggac ggaggaagaa       540
     gaactagagg atgtgccgtg gttccctcgg aagatctctg agttagacag atgctctcac       600
     agagtcctca tgtacggcac cgagcttgac gccgaccacc caggattcaa ggacaacgtc       660
     tatcgacaga ggaggaagta ttttgtggat gtggccatgg gttataaata tggccagccc       720
     attcccaggg tggaatacac agaagaagag actaaaactt ggggtgttgt gtttcgggag       780
     ctctccaaac tctaccccac tcatgcttgc cgagagtacc tgaaaaactt ccccctgctg       840
     accaagtact gcggctacag ggaagacaac gtcccgcagc tggaagacgt ctccatgttt       900
     ctgaaagagc gatctggctt cacagtgaga ccagtggctg gctacctgag cccaagagac       960
     ttcctggctg ggctggccta cagagtattc cactgcactc agtacgtgcg gcatggctcc      1020
     gaccccctct acaccccgga accagacaca tgccatgagc tcctgggaca tgtgccactg      1080
     ctggcggatc ccaagttcgc tcagttttct caagaaatag gcttagcctc tctgggagcc      1140
     tcagatgaag acgttcagaa actggccacg tgctatttct tcacaatcga gttcggcctt      1200
     tgcaagcaag aaggtcaact gcgggcgtac ggagcagggt tactttcctc catcggagaa      1260
     ttgaagcatg ctctttctga caaggcgtgt gtaaaagcct ttgacccgaa gacaacctgc      1320
     ttgcaggaat gcctaatcac caccttccaa gatgcttact ttgtttctga aagttttgaa      1380
     gaagccaaag agaagatgag ggattttgca aagtcaatta cccgtccttt ctcagtatat      1440
     ttcaacccct acacacagag cattgaaatt ctgaaagaca ccagaagtat tgagaatgtg      1500
     gtgcaggacc tgcgcagtga tttgaacacc gtgtgcgacg ccttgaataa aatgaaccaa      1560
     tatttgggga tttgagccta ttgtcagcac gagctcttgg gggcttagca acaatgcagt      1620
     caatgttatc caacatcaac aactttctgt gtcatggctg gctagtaagc atgcaattcc      1680
     atgtgtctat acctctatgt aacttaacat acaaaaatga tctaagaaac ccaggcagat      1740
     gaccattcag cattttaaag attgtgatct atttgaacat ctcaagtaga tttgacattt      1800
     ctgattagtg agcaaactgt aacttaagca aactgtgtct ttaaaatttg tagccaacat      1860
     tcctcacaca attccagctg ctgagtcctt gaccttttct tccttggacc tgagtctttc      1920
     ctctgtgttc attagataaa atgaaaacag ttgggaggtg gtttctactt tcaatagtat      1980
     tggtgttctc tgagataaac tagagttgct ccaagcttcg catcacagta acaaaagatt      2040
     taatatttta cttcagaagc tgttcagaaa cacagcgatt ggaatgaatc tggactgagt      2100
     gtttagacaa tgcaagaaaa gaaaaatttt gataaacagg atatatagat tgcactgacc      2160
     ttgttgaaac caatttgtgg tacgcttcct gaagtgcttt tggaaggaaa cactttgaca      2220
     aagaatattt ggaaaggtta aacagaaggg aagaaaatct tggaactgtg aatgtgtcat      2280
     tagaataaag tgaattatca gtgcaggtgt gactcctttc tcttacactg agaaccccaa      2340
     atcctgcagg gatgtgagta ccatctctga ttccgaagat ttggaaaccg agtcacagag      2400
     aaacaaaggg atttgcttca gttaggtctg ttggctgggg gtgcagtcat aatccccccc      2460
     cccctttatg ttggacttct ggcaagtcta ctgtagtgta catgcgggtt tatgtatgga      2520
     caaaaaaaga aaactaatgc gtataaaact aatgcttctc aataaacaga aacttgcccc      2580
     c                                                                      2581
//


  
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