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EBI DbfetchID AY098731; SV 1; linear; mRNA; STD; INV; 2856 BP. XX AC AY098731; XX DT 22-JUL-2002 (Rel. 72, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Choristoneura fumiferana chitinase (Chit) mRNA, complete cds. XX KW . XX OS Choristoneura fumiferana (spruce budworm) OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; OC Tortricinae; Choristoneura. XX RN [1] RP 1-2856 RX DOI; 10.1016/S0965-1748(02)00166-2 RX PUBMED; 12429133. RA Zheng Y., Zheng S., Cheng X., Ladd T., Lingohr E.J., Krell P.J., Arif B.M., RA Retnakaran A., Feng Q.; RT "A molt-associated chitinase cDNA from the spruce budworm, Choristoneura RT fumiferana"; RL Insect Biochem. Mol. Biol. 32(12):1813-1823(2002). XX RN [2] RP 1-2856 RA Zheng Y., Zheng S., Cheng X., Ladd T., Krell P.J., Arif B., Retnakaran A., RA Feng O.; RT ; RL Submitted (22-APR-2002) to the EMBL/GenBank/DDBJ databases. RL Canadian Forest Service, Great Lakes Forestry Center, 1219 Queen Street RL East, Sault Ste. Marie, Ontario P6B 3K8, Canada XX FH Key Location/Qualifiers FH FT source 1..2856 FT /organism="Choristoneura fumiferana" FT /mol_type="mRNA" FT /db_xref="taxon:7141" FT CDS 133..1806 FT /codon_start=1 FT /gene="Chit" FT /product="chitinase" FT /function="breaks down cuticular and gut chitin by FT chitinolysis" FT /note="CfChit" FT /db_xref="GOA:Q8MTK0" FT /db_xref="HSSP:1LG2" FT /db_xref="InterPro:IPR001223" FT /db_xref="InterPro:IPR001579" FT /db_xref="InterPro:IPR002557" FT /db_xref="InterPro:IPR011583" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q8MTK0" FT /protein_id="AAM43792.1" FT /translation="MRATLATLAFLAVALTAVQSEGRARIVCYFSNWAVYRPGVGRYGV FT EDIPVEMCTHIIYSFIGVTENTHEVLVIDPELDEEKNGFRNFTSLRANHPDIKFMVAVG FT GWAEGGSKYSHMVAQLSSRMAFVKSVVDFLHKYNFDGLDLDWEYPGAADRGGSFSDKDR FT FLYLVQELRRAFIRAGKGWELTAAVPLANFRLMEGYHVPDLCRELDAIHVMSYDLRGNW FT AGFADVHSPLYKRPHDQWAYEKLNVNDGLNLWEEKGCPSNKLVVGIPFYGRSFTLSAGN FT NNYGLGTFINKEAGGGDPAPYTNATGFWAYYEICTEVDKKDSGWTKKWDEAGKCPYAYK FT GTQWVGYEDERSVEIKMNWIKEKGYLGAMTWAVDMDDFRGLCGDTNPLMKLLHKHMSSY FT TVPPPRTGNTTPTPEWARPPSTSANPSEGAPIPTTIAKPKPAVPKPVPTVKPSKPTTTN FT AAPTTTKAPEAEVPKEPEAPIPVVPEIPDVEQPTDNEVDDHRVCDNDEDYIPDKKKCDK FT YWRCVNGEGVQFTCQPGTVFNVKLNVCDWPDSANREDCLA" XX SQ Sequence 2856 BP; 828 A; 613 C; 648 G; 767 T; 0 other; ggcacgagcg caaccgtgag tccgcacacg cacacacact aacaagaacg cgacaaaata 60 cgataaaaac aaatgaaatc agtgtttatg attcctggat agtggttcga tagttaaaaa 120 gttgcgtgca agatgcgtgc gacactagcg acgttggcct tcctagcggt cgcgctgacc 180 gcagtacaat cggagggcag agctcgcata gtatgttatt ttagtaactg ggcggtgtac 240 cggcctggtg taggtcgcta tggcgtcgag gacattccgg tggagatgtg tacacacatc 300 atctactcat tcattggggt caccgagaat acgcacgagg tcctcgtaat cgatcctgag 360 ttggacgaag agaagaatgg cttccgcaac ttcacgtcct tgcgagcgaa tcatccagac 420 atcaagttta tggtggcagt cggaggatgg gctgaaggcg gctccaaata ctcgcacatg 480 gtcgcccaac tgagctccag aatggcgttc gttaaaagtg ttgttgattt cctgcacaaa 540 tacaatttcg atggtctcga cctggactgg gagtaccctg gagctgcgga tcgtggtggt 600 tccttctccg acaaggaccg tttcctatac ctggttcaag agttgaggag agcctttatc 660 cgcgccggta aaggctggga gctgacagct gcggtacccc tcgctaactt caggcttatg 720 gagggatacc atgtaccaga cctgtgccgt gaactggatg cgattcacgt gatgtcgtac 780 gacttacgtg gtaactgggc cggcttcgcc gacgtgcact cgcccttata caagcgcccg 840 catgaccaat gggcgtacga gaagctgaat gtgaacgatg gcctaaacct ttgggaggag 900 aagggctgcc cgtcaaacaa gctagtggtt ggcattccgt tctatggacg ctcattcact 960 ctgtcagctg gcaacaataa ctacggtctt ggcaccttca tcaacaagga agctggtggt 1020 ggtgacccgg ccccgtacac gaatgccact ggattttggg cttactacga gatttgcaca 1080 gaagtcgaca agaaagactc tggctggacc aagaaatggg atgaggctgg aaaatgccct 1140 tacgcctaca agggaactca gtgggttggc tatgaagacg agcgcagcgt tgagatcaag 1200 atgaactgga tcaaagaaaa gggctacttg ggagcaatga cctgggccgt agatatggat 1260 gactttagag gactctgtgg ggacacgaac cctttgatga agttgctgca caagcacatg 1320 agctcttaca cagtacctcc tccacgtact ggaaatacca ctcctactcc ggaatgggcc 1380 cgtccgccct caacttcagc taacccatcc gaaggtgccc ccatccctac cactatagcc 1440 aagccaaagc ctgctgtacc taaaccagtg ccaactgtca aaccgtcaaa gcccactacg 1500 actaatgcgg cacctactac cacgaaagca cccgaagctg aggtcccgaa ggaacccgaa 1560 gctccgatcc ccgtggtccc agaaatacct gacgttgaac agcctacgga taatgaagtc 1620 gacgaccacc gtgtgtgcga caatgatgag gactacattc ccgacaaaaa gaaatgtgat 1680 aaatactggc gttgtgtgaa cggagaggga gtgcagttca cttgccagcc aggcaccgtg 1740 ttcaatgtga aattgaacgt gtgcgattgg ccagatagtg ccaaccgaga agactgtctg 1800 gcgtagccac caaaaaaaat acaaataaaa taaaaattag aatgacataa taatttcgaa 1860 atggatattg tttttaaaac tacctataca aaacccaata aagacattaa ctagaatttg 1920 ccttgcgttg tacaagttgc tctgatttac ggtggcaaca ttttaatctg atagactaaa 1980 aaaatatata ctgtcgtttt ttacttaaat aagcagaaaa tgtataattt taatttattt 2040 actcgaaaga ctgtacctac gcgattgtta taattatttg actgtatttt ttttaactgt 2100 cgacttttac taacttgaac gcctgtcaaa cctcataaaa aatactttct tagcttaaaa 2160 tctgtgagct tctgatattt atgttttgcc taaatgatgt ttatgcatgg ctattttttt 2220 aaacaaaagc cttttgtttt aatttaaaac ctaaaacaga tgtttatggg cggtgatgat 2280 ctcttgccat caggagaccc acttgctcgt ttgccatcca gtcgaataaa aaaaaaacct 2340 aaacttgcta aaagtggctc cgaagcggta acgtttcgtg tgctctgctt accccatttg 2400 ggaatacagg cgtgatgttt gtgtgtgtgt gtaatttaaa caacattttg tttcgtttag 2460 tatctgatta gtctacataa tttatgttgt aaatcgtccc tctattattc agctccattt 2520 ttgccgaatt ctggcacgaa agcattctcg tttgaattac cttctagaca gttatttata 2580 attagatagg agtatttata agttataagt taggtcataa taagttcttg tataatattg 2640 tcgtatttcg ttcttattca tggaacttaa tacgctaatg taatggtatg tacaagttat 2700 ttatctgata cgtttaccta ctgatactct ttacaataaa gagatggaat tgtgtatttt 2760 tatgatctaa atgcagaaga ttttattaga agttaagtga cattatttat tatcgacgaa 2820 aataaaaact tgaaattgaa aaaaaaaaaa aaaaaa 2856 // |
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