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EBI Dbfetch

ID   AY095086; SV 1; linear; mRNA; STD; INV; 2094 BP.
XX
AC   AY095086;
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DT   16-APR-2002 (Rel. 71, Created)
DT   16-APR-2002 (Rel. 71, Last updated, Version 1)
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DE   Drosophila melanogaster RE56341 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-2094
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (09-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2094
FT                   /organism="Drosophila melanogaster"
FT                   /map="70E3-70E3"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             507..1499
FT                   /codon_start=1
FT                   /gene="CG9238"
FT                   /product="RE56341p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0036428"
FT                   /db_xref="InterPro:IPR005036"
FT                   /db_xref="InterPro:IPR017434"
FT                   /db_xref="UniProtKB/TrEMBL:Q8SWT8"
FT                   /protein_id="AAM11414.1"
FT                   /translation="MVNNASAAVQGQGPSQQKAGATPLGVGSRSGRSYLERMASAPLLT
FT                   NQPKSCLSRKSCLHKSQNTTASSADLSPTDTDVADSASHSCICSKDSDSNGEVSRGPKK
FT                   HVIFADDEGLSLTEVRVMSEPSNVPPYWSMKFLEQITQGLVSPHPPDQWTVDFKQPASD
FT                   YLSFRQKIERDFVSLENVIVKDEESIVVGTIKVKNIDFQKEIIVRVTWDDWKSQQDIFC
FT                   TYARAYGPATCAHVVFDTFSFKITLPPSSKRLEFCICYRTNETEYWDNNDGKNYTISKR
FT                   SPFYYNALSPYDKGQNRNSSQQIRSTLTDALAKVQDQNGWHQEPHTPYW"
XX
SQ   Sequence 2094 BP; 661 A; 458 C; 469 G; 506 T; 0 other;
     gattcgtttt cgcatcgtcg aagcgtacgg ttcataggag gaacggaacg aagcggggaa        60
     cgcgacggaa actagttgct gtttttttgt ccgtgttaaa taattgacac aagaaaattt       120
     agctacactt aagcaaagtc cgcgaaaaat ctattaaaaa tcgttcgtcg ttttgtgtgt       180
     gtgaccacga aaaaagtgcc ccgatcggag gattttaata aattcaatta aggttccgtc       240
     ccaacgatcg tttttcattg tctgacgctc acgcgtgatg tacaaatgaa aaagtaaaaa       300
     tttaaataag atcaaagaaa gaaagatcac agtaaaattt aaagtggatt gactgcacaa       360
     gaaaaagaaa agttccttac ctcctagcca gaagtcaaaa gtgaagcgga aaacagagtg       420
     gagataacaa ttaacgctac aatgacgagc ccaacagagc gtcgcgctac tgccggcccc       480
     aagtgataac gctggcctcc aaagccatgg tcaacaacgc ctcggcggcg gtccagggtc       540
     agggtcccag tcagcagaag gcgggtgcca cgcccctggg cgtgggcagt cgttccggac       600
     ggagttacct ggagcgaatg gcctcggcgc cgctactcac caatcagccc aaatcctgtc       660
     tcagccgcaa atcctgcctg cacaaatccc agaacactac agccagttcc gcagatctct       720
     cgccgacgga caccgatgtc gcggacagtg ccagtcatag ctgtatctgc agcaaggata       780
     gtgacagcaa cggcgaagtg agccgtggcc ccaaaaagca tgtgatcttc gctgatgatg       840
     agggtctatc gctaaccgag gttcgtgtga tgtccgaacc ctcgaatgtg ccgccatatt       900
     ggagcatgaa gtttctggag caaattacac agggcctggt cagcccacat cctccggatc       960
     agtggacagt ggacttcaag cagccagcct cagactatct atcatttaga caaaagatag      1020
     aacgcgactt tgtttccttg gagaatgtga tcgtcaagga tgaggaatcg attgtcgtgg      1080
     gcaccatcaa ggtgaagaat atcgacttcc agaaggagat cattgtccgt gtgacctggg      1140
     atgattggaa gagccagcag gatatcttct gtacatacgc cagggcctat ggaccggcta      1200
     cttgtgctca tgtagtcttc gatacattct ccttcaaaat caccttgccg ccatcctcca      1260
     agcgcctgga attctgcatc tgctatcgca ccaacgaaac agaatattgg gataataatg      1320
     atggtaaaaa ctacaccatt agcaagcgat cgccctttta ttacaacgcc ttgtcgccct      1380
     atgataaggg tcagaatcgc aactcgagcc agcaaataag gtccaccctg accgatgcct      1440
     tggccaaggt gcaagaccaa aatggctggc accaggagcc acatacgcca tattggtgaa      1500
     atcgcctggg aacgggattg gattttcctg acccaagcga ttgaataaag tttctcattt      1560
     aggccacatg aacagaaaga aacagaattg gaaaagattt aaagtgttat aatcagtttc      1620
     attgacagag ggagagtcca aaagatttta ccactaacga aactttttga cctaagctaa      1680
     tacccggtac aaatatccca attttaatgt gccattgact tgaggtttac tcaatataaa      1740
     atgagatagg agggcttata actacttcta ctgagcgaag cccgaatttg tatgtcttgt      1800
     ctttagtcaa cttgatggaa tttcaaaatc tatgtataac tttttaaaat gttttatgtt      1860
     tgactgtaaa gaatttttgg aaaagataga tttatatgtt tacctgtatg cctgtgtgat      1920
     cgtctacatc tatataactg atactagatt tatgttaact aaaaacgaaa aaaaaaacct      1980
     tataaaaatg aaaggagatg aattttgagg cgtgaagcat tcaagcaaac cattgtttcg      2040
     aaatttactg caactgcaaa ataaagaaaa caaaaaccaa aaaaaaaaaa aaaa            2094
//


  
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