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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY094665; SV 1; linear; mRNA; STD; INV; 1105 BP.
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AC   AY094665;
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DT   16-APR-2002 (Rel. 71, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Drosophila melanogaster AT28119 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1105
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (03-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1105
FT                   /organism="Drosophila melanogaster"
FT                   /map="96B14-96B14"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             98..1066
FT                   /codon_start=1
FT                   /gene="CG11780"
FT                   /product="AT28119p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0039258"
FT                   /db_xref="GOA:Q8T3P3"
FT                   /db_xref="HSSP:1NMM"
FT                   /db_xref="InterPro:IPR003859"
FT                   /db_xref="UniProtKB/TrEMBL:Q8T3P3"
FT                   /protein_id="AAM11018.1"
FT                   /translation="MVNISTINWVFVCGLSFCLGGIAVLSLMPLGSDCVCPLSNPLAKL
FT                   AGGGEGVSVIKKEPADEKQPQPHDHGASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQ
FT                   GVAHHIFVLNQVDRFRFNRASLINVGFQFASDVYDYIAMHDVDLLPLNDNLLYEYPSSL
FT                   GPLHIAGPKLHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDGEFFVRIRDAG
FT                   LQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNVKYKILKV
FT                   HEMLIDQVPVTILNILLDCDVNKTPWCDCSGTAAAASAVQT"
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SQ   Sequence 1105 BP; 286 A; 290 C; 287 G; 242 T; 0 other;
     gcacacttcc aaccggcagc taaaaagttt ataatatttt ccgcctatgg cccgacttcg        60
     ttcaaaccac tggacttctg tataaaagcg gctccaaatg gtgaatatat ccaccataaa       120
     ctgggtcttc gtctgcggcc tgtccttttg cctgggcggg attgcggtgc tcagtctcat       180
     gccattggga tcagactgcg tgtgcccgct gtccaatccg ctggccaagc ttgccggtgg       240
     cggagaagga gtatccgtga ttaagaaaga gccagccgat gagaagcagc cacagccaca       300
     tgaccacggt gcgtccgtac acaagatggc actgctggtg ccgtttcgag accgatttga       360
     ggaactcctc cagttcgtcc cccacatgac cgcctttttg aagcggcagg gcgtggcgca       420
     ccacatcttt gtgctgaacc aggtggacag gttccgcttc aatcgcgcct ctctcatcaa       480
     cgtgggtttc cagtttgcca gcgatgtgta cgattacatt gccatgcacg acgtagactt       540
     gctgcccttg aatgacaatc tgctctatga gtatcccagc agcttgggac cactgcacat       600
     cgccggaccg aagctacatc ccaaatacca ctatgataac ttcgttggag gaatattact       660
     ggtgcgacgc gagcacttta agcagatgaa cggcatgtcg aaccagtact ggggctgggg       720
     attagaggac ggcgagttct tcgtgcgcat ccgggatgca ggactgcagg tgacgcggcc       780
     gcagaacatt aagactggca ctaatgatac attcagccat attcacaacc gctatcatcg       840
     taagcgggac acccagaagt gcttcaacca gaaggagatg acccgcaagc gggaccacaa       900
     gacgggcctg gacaacgtga agtacaaaat acttaaggtg catgagatgc tcattgacca       960
     ggtgccggtg accatcctca acattttgct cgattgtgat gttaataaaa cgccttggtg      1020
     cgactgctcc ggaacggcag cggctgcatc ggcggtacaa acctgatggg ttgtgttaaa      1080
     ccaaaaaaaa aaaaaaaaaa aaaaa                                            1105
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