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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY089365; SV 1; linear; mRNA; STD; INV; 1599 BP.
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AC   AY089365;
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DT   19-MAR-2002 (Rel. 71, Created)
DT   19-MAR-2002 (Rel. 71, Last updated, Version 1)
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DE   Drosophila melanogaster AT18767 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1599
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (12-MAR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1599
FT                   /organism="Drosophila melanogaster"
FT                   /map="70F5-70F5"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             9..1535
FT                   /codon_start=1
FT                   /gene="CG17173"
FT                   /product="AT18767p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0036447"
FT                   /db_xref="GOA:Q8T440"
FT                   /db_xref="InterPro:IPR006759"
FT                   /db_xref="UniProtKB/TrEMBL:Q8T440"
FT                   /protein_id="AAL90103.1"
FT                   /translation="MKVISIRWKTCLPGLIIVSYLVCALLYFGMDITKIEPVEPRVVKN
FT                   KTKVPRMYAKTINHDGNWETIVTNPELKPRYRVGGGRTGVQFVIGVPTVLRPKKNYVLQ
FT                   TVDCLIRRMTPEQRDNCLIVIFVGETKLQFAKFIVRELRVNHSTHMQAGLIDVIAPPLN
FT                   YYPNFSRLHITLNDDPQRVQWRTKQNLDYIYLMSYAKSRGLYYLQLEDDVMANVGFMDY
FT                   IQKFAVLHGSFRIAHQIDWIVMSFSELGFIGKLFRTSVLSSFVAYLKLFYNDQPIDWLL
FT                   QSFVTLQSCRWDSVSDPECQRDFESRLLRSSQSQFQHMGAQSSLADKQQYQKDAFFNHN
FT                   FARQRLRHLRQPLNLIATHRNSLLKHNLDLVEGETFIWIYMPRMPKMMKYLITNQFKQT
FT                   QLHIRNAKDTAHNLAEFNIELVKGSPTLVANSSSTRQCGFVMSHTVQSFAERDGKAELP
FT                   YNYMYYYIKEEPEGLSWFRRFRWASNASSFHELRSTMVLLLLVFQFVNNL"
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SQ   Sequence 1599 BP; 435 A; 386 C; 384 G; 394 T; 0 other;
     atcgaatcat gaaggtgatc agcattcgct ggaagacctg cctgccaggc cttataatag        60
     tttcttacct ggtgtgtgct ctgttgtatt tcggaatgga tataacaaag attgagccag       120
     tggaaccaag agtagtgaaa aacaagacca aagtgccacg aatgtatgcc aaaaccatca       180
     atcatgatgg caactgggag actattgtaa ctaatccgga attaaagccc agatatcggg       240
     ttggcggcgg taggactggt gtccagttcg tgattggagt acccactgta ctgcgaccga       300
     aaaagaacta tgtgctccaa accgtggact gtctgatccg tcgaatgact ccggagcagc       360
     gcgacaattg tctaattgtt atattcgtgg gtgaaactaa gctgcagttc gccaagttca       420
     tagtaaggga actgcgtgtg aatcattcga cgcatatgca agctggccta atcgatgtca       480
     ttgcgccacc cttgaattac tatcccaact tctcgagact ccacatcacg ctgaacgatg       540
     atccgcagcg agttcagtgg aggaccaaac agaacctgga ctacatatac ctgatgtcct       600
     atgctaagag caggggtttg tactacctgc aactggagga cgatgtgatg gcgaacgtgg       660
     gtttcatgga ctacatccag aagtttgcag tactgcatgg cagctttcgg attgcccacc       720
     agatcgattg gattgtgatg agcttcagtg agctgggctt catagggaag ctctttcgca       780
     cctccgtgct gagctccttc gtggcgtacc tcaagttgtt ctacaatgac cagcccattg       840
     actggctgct ccagagcttc gtgaccctgc agagctgtcg ctgggatagt gtttccgatc       900
     ccgaatgtca gcgggacttc gagtccagac tgctgcgctc ctcgcaatcc cagtttcagc       960
     atatgggtgc acaatcgtca ttggcggata agcagcaata tcaaaaggat gccttcttta      1020
     accataactt tgcaaggcag cgcttgaggc atctgcgaca gccgctcaac ctgatcgcca      1080
     cccatcggaa ctcgctgttg aagcataatc tcgacctggt agagggtgaa acgtttatct      1140
     ggatctatat gccacggatg cccaagatga tgaagtatct gataaccaat cagttcaagc      1200
     agacgcagct tcacatacgc aatgcgaagg acacagccca taatctggcc gagttcaata      1260
     ttgaactggt caagggatcg cccaccctgg tggccaacag ctcctcgaca aggcagtgtg      1320
     gattcgtcat gagtcacacc gtccaatcgt ttgcagaaag ggatggaaaa gcggagcttc      1380
     cctataatta tatgtactac tacattaagg aggagcccga ggggctcagc tggttccgtc      1440
     gattccgttg ggcctccaat gcatcctctt tccacgagct acgatccaca atggtattac      1500
     tccttcttgt ttttcagttt gtaaataatt tataaaaaac ttcaaagata tcaacaccac      1560
     attagcagca cgttcaattt caaaaaaaaa aaaaaaaaa                             1599
//
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