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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY081347; SV 1; linear; mRNA; STD; PLN; 1465 BP.
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AC   AY081347;
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DT   25-MAR-2002 (Rel. 71, Created)
DT   25-MAR-2002 (Rel. 71, Last updated, Version 1)
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DE   Arabidopsis thaliana unknown protein (At2g28110) mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1465
RA   Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J.,
RA   Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K.,
RA   Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X.,
RA   Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (26-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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CC   e-mail for correspondence: arab@sequence.stanford.edu
CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Nguyen,M.,
CC   Southwick,A., Karlin-Neumann,G.,  Lam,B., Miranda,M., Palm,C.J.,
CC   Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R., Chung,M.K.,
CC   Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H., Shinn,P.,
CC   Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
CC   Nguyen,M, (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed
CC   equally to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford)  contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1465
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="2"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL09-64-F03 (R24614)"
FT                   /note="This clone is in pBluescript ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             47..691
FT                   /codon_start=1
FT                   /gene="At2g28110"
FT                   /product="unknown protein"
FT                   /db_xref="GOA:Q8RXC5"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q8RXC5"
FT                   /protein_id="AAL91236.1"
FT                   /translation="MTTHKHRRTEKNLCFKQYYKWILCFILTLYFFASFFVDHDQDHRS
FT                   STSISKHLLTNHKPKLFASRAMFESKIHDHKLGFTSQQPNIKTDVFNNLKIYVYDLPSK
FT                   FNKDWLANDRCTNHLFAAEVALHKAFLSLEGDVRTEDPYEADFFFVPVYVSCNFSTING
FT                   FPAIGHARSLINDAIKLVSTQYPFWNRTSGSDHVFTATHDFGSCFHTMSYC"
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SQ   Sequence 1465 BP; 402 A; 329 C; 306 G; 428 T; 0 other;
     aacaaccagc tcaggccata agattcatcc cggagaaaca agaacgatga caacacataa        60
     acatagaaga acagagaaaa atctctgttt taagcaatac tacaaatgga tcctctgttt       120
     tatcctcact ctctattttt ttgcttcctt ctttgtcgac catgatcaag atcatagatc       180
     ttctacttcc atatcaaagc atcttcttac taaccataaa cctaagcttt tcgcttctcg       240
     tgccatgttt gaatctaaaa tccatgatca caaacttggg tttacctctc aacaacctaa       300
     catcaaaaca gacgtattca acaatttgaa aatctacgtc tatgacttac cttcaaagtt       360
     caacaaagac tggttagcca atgatagatg caccaaccac ctctttgccg cggaagtggc       420
     tctccataag gcgtttctca gcctcgaagg agatgtaagg acggaagatc cgtatgaagc       480
     cgatttcttc tttgtccctg tctatgtctc ttgcaacttc agcaccatta atggctttcc       540
     agcgattggc catgcacgat cactcatcaa tgacgcgata aagctcgtct cgactcaata       600
     ccctttttgg aaccgaacca gtggctctga tcatgtcttc acggccacac acgactttgg       660
     ctcttgcttc cacaccatga gctattgctg atggagtacc aatttttttg agaaactcta       720
     taattttgca aacatttggt gttactttta accatccatg ccaagaggta gagaacgtgg       780
     tgataccacc gtacatctca ccggaaagtt tacacaagac tcaaaagaat attccggtaa       840
     ctaaagaacg agacatttgg gtttttttcc gtggcaagat ggaacttcat cccaaaaaca       900
     tcagtggacg cttctatagc aagcgtgtaa ggacgaatat atggcggagt tacggtggtg       960
     accggaggtt ttatctccaa cggcaaagat ttgccggtta ccagtcagaa atagctcgtt      1020
     ctgttttctg tttatgtcct ctcgggtggg caccgtggag cccaagactt gttgaatcgg      1080
     tggctcttgg ctgtgttccg gtgattatag ccgacgggat tcgtttgccg ttcccttcca      1140
     ccgtacgttg gccggatatt tcgctcacgg tggcggagag agacgttgga aagctagggg      1200
     atattttgga acacgtggcg gctactaatt tgtcagtcat acagagaaac ttggaggatc      1260
     cgtctgttag gcgggccctt atgtttaatg ttccttcaag agagggagat gccacgtggc      1320
     aagttttgga ggctttgtca aagaaattga ataggtctgt tagaaggtca aactctttct      1380
     tgtaaaccaa tataattttg acacctgtgt attactattt tttttcctgg ctagtgagat      1440
     ataagagtag taagctctta aatgt                                            1465
//
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