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EBI DbfetchID AY078508; SV 1; linear; genomic DNA; STD; PRO; 3348 BP. XX AC AY078508; XX DT 04-DEC-2002 (Rel. 74, Created) DT 24-AUG-2005 (Rel. 84, Last updated, Version 5) XX DE Edwardsiella tarda putative beta1,4-galactosyltransferase (waaX) and Fe-S DE oxidoreductase (isoR) genes, complete cds. XX KW . XX OS Edwardsiella tarda OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Edwardsiella. XX RN [1] RP 1-3348 RX DOI; 10.1128/IAI.71.3.1343-1351.2003 RX PUBMED; 12595451. RA Srinivasa Rao P.S., Lim T.M., Leung K.Y.; RT "Functional genomics approach to the identification of virulence genes RT involved in Edwardsiella tarda pathogenesis"; RL Infect. Immun. 71(3):1343-1351(2003). XX RN [2] RP 1-3348 RA Srinivasa Rao P.S., Lim T.M., Leung K.Y.; RT ; RL Submitted (08-FEB-2002) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, National University of Singapore, Science Drive 4, RL Singapore 117 543, Singapore XX FH Key Location/Qualifiers FH FT source 1..3348 FT /organism="Edwardsiella tarda" FT /strain="PPD130/91" FT /mol_type="genomic DNA" FT /db_xref="taxon:636" FT CDS 492..1247 FT /codon_start=1 FT /transl_table=11 FT /gene="waaX" FT /product="putative beta1,4-galactosyltransferase" FT /db_xref="GOA:Q8GF12" FT /db_xref="InterPro:IPR002654" FT /db_xref="UniProtKB/TrEMBL:Q8GF12" FT /protein_id="AAL82722.1" FT /translation="MKVFIINLKRDLQKKHEIISECSRLNINHEIVEAVSGIDLSAAEV FT DRLIDKDAQIYLTKGEIGCSLSHLRIYQKIISEALPYALILEDDAILHDDLNEVIQAIE FT NVIDKESGHAYLLYKTGCVYGNQRIKLSEKYSLYESNVPTCTHGYVVTNKTARLLTAIN FT TPVRFEADAWRNFYFEKNIRPYSLNINLIDSRDQSKENSTIEEERLSRTPIQITLRESL FT DRKNSLVKFYHKICRRPFLKKMRQNNNII" FT CDS 1666..3006 FT /codon_start=1 FT /transl_table=11 FT /gene="isoR" FT /product="Fe-S oxidoreductase" FT /db_xref="GOA:Q8GF11" FT /db_xref="InterPro:IPR005840" FT /db_xref="UniProtKB/TrEMBL:Q8GF11" FT /protein_id="AAL82723.1" FT /translation="MNFYAMSNQSRQPTIGFVSLGCPKNLVDSERILTELRTEGYLVVP FT TYEDADLVIVNTCGFIDSAVQESLEAIGEALHENGKVIVTGCLGAKENQIREVHPKVLE FT ISGPHSYEQVLHHVHKYVAKPQHNPFTSLVPEQGVKLTPKHFAYLKISEGCNHRCAFCI FT IPSLRGDLESRPIGAVLDEAKRLADSGVRELLVISQDTSAYGADIQHRTGFWNGQPVKT FT SMLSLCEQLATLGIWIRLHYVYPYPHVDDVIPLMAQGKLLPYLDIPLQHASPRILKLMK FT RPGAVERTLERIKRWREICPQLTLRSTFIVGFPGETEEDFQMLLDFLREARLDRVGCFQ FT YSPVEGAAANELPDQVPDEIKQARFDRFMQLQQQISAERLQEKVGLTLPVIIDEVDEEG FT AIGRSMADAPEIDGVVYLNGERGVKPGDIVSVTIENADEYDMWGTLA" XX SQ Sequence 3348 BP; 855 A; 941 C; 846 G; 706 T; 0 other; ctgctgctgt tagatcccgc ctatgcctgg caggcgaccg acgtcgccca gcgcctgcat 60 atggccgagt ccaccctgcg ccgccgcctg agcaccgaag gcaaaagctt tcgcgatatt 120 ctagacgatg tgcgccttgg ccaggcgctg ctggcgctgc agtcggggaa cgcccccatc 180 ggcgatatcg ccagccagag cggctatgcc agcccatcgc gctttaccgc ccgctttgtg 240 cgccgctatg gcctcacccc cagcgccctg cgccaagcca tgcgccagtg aggttacgat 300 taacttcgtg ttatcaaata gaataaccgc tgaaaagacg gtatcgccaa acacagatac 360 ccaggggcga gatcgctatt gaacaaaatc acttctctgg gtgcgcaaaa aacaatcgta 420 tgataaaatc gtggattcta tatgatacaa aatgtaccat atagaattaa atttgaacga 480 cacaacacca gatgaaagta tttattataa atttaaaaag agatcttcag aaaaagcacg 540 aaataataag tgagtgcagc agattaaata ttaatcatga gattgtcgag gctgtctcag 600 gtatcgatct cagcgctgct gaggtagacc gtttaatcga taaagatgcg caaatatatt 660 taacaaaagg tgagataggt tgttccctta gccacctgcg catatatcaa aaaatcatat 720 cagaagcgct tccatacgcc ttaatcctcg aagatgatgc catcttacat gacgacctca 780 atgaggtcat tcaggccatc gaaaacgtta tagataaaga aagcggccat gcatatctgc 840 tgtataagac gggctgcgtg tacggaaacc aaagaataaa actatctgaa aaatatagcc 900 tttatgaatc aaatgtccca acatgtacac atggctatgt ggttaccaac aaaaccgcac 960 gtctccttac agcgataaat accccagtac gcttcgaggc agatgcctgg cgtaactttt 1020 attttgaaaa aaacattcgc ccctattcac tgaatattaa tttaattgac tctcgagatc 1080 agtccaaaga gaactcgaca atagaagagg agcgactgtc tcgcacgcca atacagatca 1140 cattaagaga aagtcttgat cgaaaaaatt cgttggtaaa attttatcac aagatctgcc 1200 ggcggccatt tctaaaaaaa atgaggcaga ataataatat tatataagca gcgtcgctga 1260 gatcggccgt ccgattaggc tcctctcttt ttcagtcgtc agcgagcgtc ccgataaacg 1320 catcggcggg gctcgcgact atccggcgtc agtcggctat cgccccctag aattgacgtc 1380 gccgatgcgg tgactggcca cccgaatatc acaggctacc gcgcgctacg tctggctatc 1440 cggtgttatc gtccccaata tcacgcgaga gccatctcga taccgcgcgg tgggtgacgc 1500 aggccggcct agcccgccgc cgagaggcgc tacttctcgc tctccacatg cggcgtgaaa 1560 cgcgcggtga agccagaaag gcgcacgccg cgccaccagg ataaatagcg gtacaatttc 1620 agcccagagc gctgtaaaat ccctgcccta tcataaccag acacgatgaa tttttacgct 1680 atgagcaatc aatcccgcca accgacaatc ggttttgtct ccctcggctg cccaaaaaac 1740 ctggtcgact ccgaacgcat cctgaccgag ctgcgcaccg aaggctacct ggtggtaccg 1800 acctatgaag acgccgatct ggtgatcgtt aacacctgcg gctttatcga cagcgcggta 1860 caggagtctc tggaggccat cggcgaggcg ctgcatgaga atggaaaggt catcgtgact 1920 ggctgcctgg gtgccaaaga gaaccagatc cgggaagtcc accccaaggt gctggagatc 1980 tctgggccgc acagctatga gcaggtgctg caccacgtac acaaatacgt ggccaagccg 2040 cagcacaacc ctttcaccag cctagtgccg gagcagggcg tcaagctaac gcccaagcat 2100 ttcgcctatc tgaaaatctc cgaaggctgt aatcatcgct gcgcattctg cattatcccc 2160 tctctgcgcg gcgatctgga aagccggcca atcggcgctg tgctagacga ggccaagcgc 2220 ctggccgact ccggcgtccg ggagctgctg gtcatctcgc aggatacctc tgcctacggc 2280 gcagatatcc agcatcgcac cggcttttgg aacggtcagc cggtcaaaac cagcatgctc 2340 agcctgtgcg aacagctggc gacgctgggg atctggatcc gtctgcacta tgtttacccc 2400 tatccgcacg tggatgacgt tatcccgctg atggcgcagg gcaaactgct gccctatctg 2460 gatattccgc tgcagcacgc cagcccgcgc attctgaagc tgatgaagcg ccccggcgcc 2520 gttgagcgta ccctggagcg gatcaaacgc tggcgcgaga tctgtccgca gctgaccctg 2580 cgttcgacct ttatcgtcgg cttccccggc gagacggaag aggactttca gatgctgctg 2640 gacttcctgc gcgaggcacg cctggatcgc gtcggctgct tccagtacag cccggttgaa 2700 ggcgccgccg ccaacgaact gcccgaccag gtgccagacg agatcaagca ggcgcgcttc 2760 gatcgcttta tgcagctgca gcagcagatc tccgcagagc gcctgcagga aaaagtgggg 2820 ctgacgctgc cggtgatcat cgatgaggtt gacgaggaag gcgccattgg ccgtagcatg 2880 gccgatgcgc cggagatcga cggcgtggtg tacctaaacg gtgagcgtgg ggtcaaaccg 2940 ggcgatatcg tcagcgttac cattgaaaac gccgacgaat acgatatgtg gggcactctg 3000 gcctgatgag gcatcagcgc gtcgctctgc gcggcgcgct ttcctacgga tagcgtatcg 3060 taacgctact cagtggactg aataataaag aaaataatcg atatttaata aaaacaatcg 3120 gtttattatc ccctccgatc caatacccga tttataccga ttatcccccg tcatcctcgc 3180 cgcttaatgc cctctttttt acctgccgat acaaaaaaac accagcggta aaatgtgatc 3240 atcgcgacgc ctctccggct aatcgcaggg catgatcgta ggatcagaat agcggtaaac 3300 aaaacccact catggctgat gcgggatccg tctaccgttt tgcccttg 3348 // |
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