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EBI DbfetchID AY075682; SV 1; linear; mRNA; STD; PLN; 1589 BP. XX AC AY075682; XX DT 22-FEB-2002 (Rel. 70, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 3) XX DE Arabidopsis thaliana AT5g55180/MCO15_13 mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1589 RA Shinn P., Chen H., Cheuk R., Kim C.J., Meyers M.C., Banh J., Bowser L., RA Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., RA Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., RA Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., RA Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., RA Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Arabidopsis cDNA clones"; RL Unpublished. XX RN [2] RP 1-1589 RA Shinn P., Chen H., Cheuk R., Kim C.J., Meyers M.C., Banh J., Bowser L., RA Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., RA Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., RA Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., RA Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., RA Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT ; RL Submitted (25-JAN-2002) to the EMBL/GenBank/DDBJ databases. RL Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology RL Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey RL Pines Road, La Jolla, CA 92037, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Shinn,P., Chen,H., CC Cheuk,R., Kim,C.J., Meyers,M.C., Banh,J. Bowser,L., Chang,E., CC Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., Lam,B., CC Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J., CC Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C., CC Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W., Theologis,A., CC and Ecker,J.R. CC Shinn,P. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk) CC contributed equally to this work as PIs. XX FH Key Location/Qualifiers FH FT source 1..1589 FT /organism="Arabidopsis thaliana" FT /chromosome="5" FT /mol_type="mRNA" FT /clone="RAFL09-22-D24(R21678)" FT /note="ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..46 FT CDS 47..1429 FT /codon_start=1 FT /product="AT5g55180/MCO15_13" FT /note="beta-1,3-glucanase-like protein" FT /db_xref="GOA:Q8S9I6" FT /db_xref="HSSP:1GHS" FT /db_xref="InterPro:IPR000490" FT /db_xref="InterPro:IPR012946" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q8S9I6" FT /protein_id="AAL77689.1" FT /translation="MAVFVLSLLILSSFSAIPFTYADSGMIGVNYGRIADNLPAPEKVV FT ELLKTQGINRIKLYDTETTVLTSLANSGIKVVVSLPNENLASAAADQSYTDTWVQDNIK FT KYIPATDIEAIAVGNEVFVDPRNTTTYLVPAMKNVQSSLVKFNLDKSIKISSPIALSAL FT ASSYPPSAGSFKPELIEPVIKPMLDLLRKTSSHLMVNAYPFFAYAANADKISLDYALFK FT ENAGNVDSGNGLKYNSLLDAQIDAVFAAMSAVGFNDVKLVVTETGWPSAGDENEIGAGS FT ANAAAYNGGLVKRVLTGNGTPLKPKEPLNVYLFALFNENQKTGPTSERNYGLFYPNENK FT VYDVSLNGKSTPVNDNKEKVVPVKPSLVGQTWCVANGKTTKEKLQEGLDYACGEGGADC FT RPIQPGATCYNPESLEAHASYAFNSYYQKNARGVGTCNFGGAAYVVSQPPKYGKCEFPT FT GH" FT misc_difference 248 FT /replace="g" FT /note="compared to genome" FT 3'UTR 1430..1589 XX SQ Sequence 1589 BP; 417 A; 361 C; 383 G; 428 T; 0 other; atacaaaaac tgaaaccttt ctctatttat ctctctatac acaacaatgg cggtcttcgt 60 tttatctcta ctcatactct cttccttctc agccattcca ttcacttatg cagattctgg 120 aatgatcgga gttaactacg gccgtatagc agacaatctt ccggcaccgg agaaagtagt 180 tgagctactg aaaacacaag gaatcaaccg catcaagctt tacgacaccg agacaactgt 240 actaacctca ctcgcgaact ccggaatcaa agtcgttgtc tctctcccca acgaaaacct 300 cgcttccgcc gccgcagatc agagctacac cgacacttgg gttcaggaca acataaagaa 360 gtacattcca gcgacggata tcgaagcaat cgccgttggg aacgaagtgt tcgtcgatcc 420 gaggaacacg acgacgtatc tcgttccagc tatgaagaat gttcaaagct ctctcgtcaa 480 gttcaatctc gacaaatcca ttaagatctc gtcgccgatt gctttaagcg cgttggcgag 540 ttcgtatcca ccgtcggctg gttcgtttaa accggagtta atcgaaccgg ttattaaacc 600 gatgcttgat ctcctccgca aaacgtcgtc gcatcttatg gtgaatgctt atcctttctt 660 tgcttacgca gctaacgccg ataagatctc gttggattac gcgttgttta aggagaacgc 720 cgggaatgtt gattccggta acggtttgaa gtataacagt ctcttagacg ctcagatcga 780 cgccgttttc gccgcaatgt ccgccgttgg atttaacgac gttaagcttg tggtgacaga 840 gacaggctgg ccttctgccg gagacgagaa cgagattggt gctggttcgg ctaacgcggc 900 ggcgtataac ggcgggttag ttaaaagagt gttgacggga aacggaacgc cgttaaaacc 960 gaaggagcca ctaaacgttt atctgttcgc tctgtttaac gagaatcaga aaacgggtcc 1020 gacttctgag agaaactacg ggttgtttta cccaaacgag aacaaagtgt atgacgtttc 1080 gctcaacggt aagtcaacgc cggtcaacga taacaaagag aaggttgttc cggtgaaacc 1140 gtcgctcgtg ggacagacgt ggtgtgtggc gaatggtaaa acgacgaagg agaagcttca 1200 ggaaggtctc gactacgctt gtggcgaagg aggtgctgat tgccgtccga ttcaaccggg 1260 tgccacgtgt tataatcctg aatcgttaga agctcacgct tcctacgcgt tcaacagtta 1320 ctatcagaag aacgcacgtg gagttggcac gtgtaatttt ggtggtgcag cgtacgtggt 1380 ctcgcaacct cctaagtatg ggaaatgcga gtttccaaca gggcattgaa atggatatag 1440 agaagaagag gatcgtgcgg atttatttac gttatttatt ttgatacatt gttcttttgt 1500 cattcgagta tatgatttgc gtatatttat ttttattatt gtatatttgg ttggtttcat 1560 cggataaata gtcagatttt ctttccccc 1589 // |
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