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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY075435; SV 1; linear; mRNA; STD; INV; 873 BP.
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AC   AY075435;
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DT   04-FEB-2002 (Rel. 70, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Drosophila melanogaster LP07759 full length cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-873
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (18-JAN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..873
FT                   /organism="Drosophila melanogaster"
FT                   /map="70A8-70A8"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             12..821
FT                   /codon_start=1
FT                   /gene="CG10725"
FT                   /product="LP07759p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0036362"
FT                   /db_xref="GOA:Q8SY30"
FT                   /db_xref="HSSP:1DQC"
FT                   /db_xref="InterPro:IPR002557"
FT                   /db_xref="UniProtKB/TrEMBL:Q8SY30"
FT                   /protein_id="AAL68250.1"
FT                   /translation="MISRLTLLALVALLGSCSAADGDVNVCSNVVNNLFVPQVGNCSKY
FT                   FLCMNEIAVPRECPTDYYFDARDQECVPLMEVECIGSCKNRGLSSFCYDRTCTKYVLCF
FT                   DGTPVIRQCSDGLQYNALTDRCDYPQYVDCVDNLRSRNNNPDDIVFIPSKARCDKYYIC
FT                   MDGLPQVQNCTSGLQYNPSTQSCDFPSKVNCTVESLQRNILPFARAPPRLADIECPSEG
FT                   AHFIAHQKRQDAYYYCLNGRGVTLDCTPGLVFDAKREECREPHLVGF"
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SQ   Sequence 873 BP; 208 A; 238 C; 218 G; 209 T; 0 other;
     caaccttgaa tatgataagt cgcctgaccc ttttggcact ggttgccctg cttggaagct        60
     gtagcgctgc tgatggcgat gtcaatgtct gctccaatgt ggtcaacaat ctctttgttc       120
     cccaggtggg caactgtagc aagtacttcc tgtgcatgaa tgagatagct gtaccccgtg       180
     aatgccccac ggactactac ttcgatgcga gggatcagga gtgtgttccc ctgatggagg       240
     tcgagtgtat tggatcctgt aagaaccgtg gtttgtcatc gttctgttac gatcgcacgt       300
     gcaccaagta cgttctctgc ttcgacggca ctccggtgat ccgtcagtgc tccgatggac       360
     tgcagtacaa cgccctgacc gatcgctgtg actatccgca gtatgtcgac tgcgtggaca       420
     atctgcgcag ccggaataat aatccggatg acatcgtttt catacccagc aaggctcgct       480
     gtgacaagta ctacatttgc atggatggtc ttcctcaagt ccagaactgc acaagtggcc       540
     tgcagtacaa tccaagcact cagagctgcg atttcccctc gaaagtcaac tgcacggtgg       600
     agagccttca acggaatatc ctgccctttg cccgagctcc gccacgtctc gccgacattg       660
     agtgtccatc ggagggcgcc cactttattg cccaccagaa gcgtcaggat gcgtactact       720
     actgcctgaa tggacgtgga gtcaccttgg actgcacacc cggcctggtg ttcgatgcca       780
     agcgcgagga gtgccgtgaa ccacacctcg tgggcttcta gttactcgaa ataaagatcc       840
     aatacgattt caaacaaaaa aaaaaaaaaa aaa                                    873
//
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