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EBI DbfetchID AY074870; SV 1; linear; mRNA; STD; PLN; 1573 BP. XX AC AY074870; XX DT 12-FEB-2002 (Rel. 70, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Arabidopsis thaliana At1g21480/F24J8_23 mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1573 RA Shinn P., Chen H., Cheuk R., Kim C.J., Meyers M.C., Banh J., Bowser L., RA Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., RA Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., RA Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., RA Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., RA Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Arabidopsis cDNA clones"; RL Unpublished. XX RN [2] RP 1-1573 RA Shinn P., Chen H., Cheuk R., Kim C.J., Meyers M.C., Banh J., Bowser L., RA Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., RA Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., RA Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., RA Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., RA Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT ; RL Submitted (14-JAN-2002) to the EMBL/GenBank/DDBJ databases. RL Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology RL Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey RL Pines Road, La Jolla, CA 92037, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Shinn,P., Chen,H., CC Cheuk,R., Kim,C.J., Meyers,M.C., Banh,J. Bowser,L., Chang,E., CC Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., Lam,B., CC Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J., CC Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C., CC Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W., Theologis,A., CC and Ecker,J.R. CC Shinn,P. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk) CC contributed equally to this work as PIs. XX FH Key Location/Qualifiers FH FT source 1..1573 FT /organism="Arabidopsis thaliana" FT /chromosome="1" FT /mol_type="mRNA" FT /clone="RAFL05-14-J23(R21524)" FT /note="ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..71 FT CDS 72..1460 FT /codon_start=1 FT /product="At1g21480/F24J8_23" FT /note="unknown protein" FT /db_xref="GOA:Q8S9K6" FT /db_xref="InterPro:IPR004263" FT /db_xref="UniProtKB/TrEMBL:Q8S9K6" FT /protein_id="AAL75891.1" FT /translation="MASLTSNKPRNFGAYSHYATPCTRTHQIGPLFLVVSTFFVTRLFD FT QWFSESNSVTPVIDLRRTSSSYGIKTDNGIIRWPERGYGSHLSLKIYVYDENEIDGLKE FT LLYGRDGSVKTTACLKGQWGSQVKIHKLLLESKFRTIKKDEADLFFVPAYVKCVRMLGG FT LNDKEINQTYVKVLSQMPYFRRSGGRDHIFVFPSGAGAHLFRSWSTFINRSIILTPEAD FT RTDKKDTTAFNSWKDIIIPGNVDDAMTKNGQPDVQPLPLSKRKYLANYLGRAQGKAGRL FT KLIDLSKQFPDKLECPDLKFSGTEKFGRTTYFEHLRNAKFCLAPRGESSWTLRFYESFF FT VECVPVLLSDHAELPFQNVIDYAQVSIKWPSTRIGSEFLDYLASISDRDIEGMIARGRK FT IRCLFVYGPDSAPCSAVKGILWELQRKVRHFQQSTETFWLHNGSFVNRELVQFSSWRPP FT MPLP" FT misc_difference 159 FT /replace="g" FT /note="compared to genome" FT 3'UTR 1461..1573 XX SQ Sequence 1573 BP; 442 A; 309 C; 357 G; 465 T; 0 other; aagcgaaaac aaaaaaaaat gccttaaaac atttgaagaa gcaaaacgaa gaaacagtga 60 gagagataga aatggcgagc ttaactagta ataagcctag aaattttggt gcgtatagtc 120 actacgctac tccctgcact cgcacgcacc agattggacc tctttttctc gtcgtctcta 180 ccttcttcgt cactaggctt ttcgatcagt ggttctcgga atccaattcc gttactccgg 240 tgattgatct ccgtcgtact tcttcttctt acggaatcaa aactgataac ggtattatac 300 ggtggccgga gcgaggttat gggtctcacc tctcgctgaa gatctacgtt tatgatgaga 360 atgagatcga cggtcttaaa gagctgttgt acggtaggga tggtagtgtt aagaccaccg 420 catgcttgaa aggtcaatgg ggatctcagg ttaaaattca caagttgctt ttggagtcca 480 aatttaggac gattaagaaa gatgaagcgg atttgttctt tgtgccagct tatgttaaat 540 gtgtgagaat gttgggaggt cttaatgaca aggagatcaa tcagacctat gtcaaggttt 600 tgagtcaaat gccgtatttc cgaagatctg gtggtcgtga tcatatattt gtttttccga 660 gtggtgctgg agctcacttg tttagatcct ggtcaacatt tatcaaccgc tctattatcc 720 tcactcccga ggctgaccgg actgacaaga aagacacaac tgcctttaat tcatggaaag 780 atataatcat accaggaaac gtcgatgatg ctatgactaa aaatggacaa cctgatgttc 840 agcctttgcc tctgtcaaag aggaagtatt tagcaaatta tttaggtcgt gcacaaggga 900 aggctggtcg acttaaattg attgacctat caaagcaatt tccagataag ctagaatgtc 960 cagatttgaa gtttagcgga actgaaaagt ttggaaggac aacatatttt gaacatctga 1020 ggaatgccaa gttctgcctc gctcctcgtg gggaatcatc atggacactt cgcttttatg 1080 aatcattctt tgtggaatgt gtcccggttc ttttatctga ccacgccgag ctgcctttcc 1140 agaatgttat cgactatgcc caagtatcga tcaaatggcc atcaactcga ataggctcag 1200 agtttcttga ttacttagct tcaatatcag atagagacat agaaggaatg atagcccgag 1260 gtcggaagat tagatgtttg tttgtgtacg gtccagattc cgcaccctgc agtgcggtta 1320 aagggattct atgggagctt caacgcaaag ttagacattt ccagcaatcg actgagacgt 1380 tttggctgca caatggcagt tttgtgaata gagaactggt ccagttcagt agctggagac 1440 ctcctatgcc tctaccttga ccggtttcaa cattccacta gaatatcttg tgtttacgaa 1500 acaaaatgaa tgatacattt gagtacagtt tttttgtgaa cttgattttt ttgtacatat 1560 cactcttcag tgg 1573 // |
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