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EBI DbfetchID AY074321; SV 1; linear; mRNA; STD; PLN; 1527 BP. XX AC AY074321; XX DT 29-JAN-2002 (Rel. 70, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Arabidopsis thaliana putative alpha-galactosidase (At3g56310) mRNA, DE complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1527 RA Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., RA Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., RA Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., RA Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., RA Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-1527 RA Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., RA Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C.C., Toriumi M., RA Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., RA Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., RA Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M., RA Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (11-JAN-2002) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Banh,J., CC Chan,M.M., Chang,C.H., Chang,E., Dale,J.M., Deng,J.M., CC Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., CC Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L., Chen,H., CC Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Lam,B., Lin,J., CC Meyers,M.C., Miranda,M., Nguyen,M., Palm,C.J., Shinn,P., CC Southwick,A., Davis,R.W., Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation is based on the January 2002 version of the Arabidopsis CC genome submitted to GenBank. XX FH Key Location/Qualifiers FH FT source 1..1527 FT /organism="Arabidopsis thaliana" FT /chromosome="3" FT /mol_type="mRNA" FT /clone="RAFL05-18-I07 (R10314)" FT /note="This clone is in a modified pBluescript vector FT (Lambda ZAP) as a XhoI/SstI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..59 FT /gene="At3g56310" FT CDS 60..1373 FT /codon_start=1 FT /gene="At3g56310" FT /product="putative alpha-galactosidase" FT /db_xref="GOA:Q8VXZ7" FT /db_xref="HSSP:1UAS" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q8VXZ7" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAL67017.1" FT /translation="MVIMKKMKDSVLFLVVGLFSLSVLVSQSIAGRVKAPLLQSNTGGL FT VFSKSFNSIYDTSMYGRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSSGL FT ADLGYIHVNIDDCWSNLLRDSEGQLVPHPETFPSGIKLLADYVHSKGLKLGIYSDAGVF FT TCEVHPGSLFHEVDDADIFASWGVDYLKYDNCFNLGIKPIERYPPMRDALNATGRSIFY FT SLCEWGVDDPALWAKEVGNSWRTTDDINDTWASMTTIADLNNKWAAYAGPGGWNDPDML FT EIGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETLEILSNKEIIAVNQDPLGVQ FT GRKIQANGENDCQQVWSGPLSGDRMVVALWNRCSEPATITASWDMIGLESTISVSVRDL FT WQHKDVTENTSGSFEAQVDAHDCHMYVLTPQTVSHSDV" FT 3'UTR 1374..1527 FT /gene="At3g56310" FT misc_feature 1512 FT /gene="At3g56310" FT /note="artifact within poly A tail" XX SQ Sequence 1527 BP; 432 A; 287 C; 356 G; 452 T; 0 other; ggtttggttc aacgaagaca catagaggaa gaagtcgccg gagaagtgaa aagacgttga 60 tggtgattat gaagaagatg aaagattcag tcttgttcct cgtcgtaggc ctcttctctt 120 tatctgtttt ggtctctcag tcgatcgcag ggagagtcaa agctccattg ttgcagagca 180 atactggtgg attagttttc agcaaatcct tcaattcgat ctatgatact tctatgtacg 240 gacgcttgca gctcaacaat ggccttgctc gaactccaca aatgggatgg aatagctgga 300 atttctttgc ttgcaatatc aatgaaactg tcataaagga aactgctgat gctttggttt 360 catctggcct ggctgattta ggatacatac atgtcaatat tgatgattgc tggtccaatt 420 tgttacgcga ttcagagggt caattggttc ctcatcctga aaccttccca tcaggaatta 480 agcttcttgc tgattatgtt cattcaaagg gtctcaaact cggtatatat tctgatgctg 540 gcgttttcac ttgtgaagtt catccgggat cccttttcca tgaagtggat gatgcagaca 600 tttttgcttc ttggggcgtg gattatctga aatatgacaa ttgtttcaac ctgggaataa 660 aaccaatcga aagataccct ccaatgcgtg atgctctaaa cgcaactggc cgctcaatct 720 tctattcact atgtgaatgg ggcgttgatg atcctgcctt gtgggcaaaa gaagttggaa 780 acagttggcg cacaaccgat gacatcaacg atacatgggc aagtatgact acaattgctg 840 atttgaataa caagtgggct gcatatgctg gacctggtgg ttggaatgat ccggatatgt 900 tggaaatagg gaatggaggg atgacatacg aggagtatcg aggtcatttt agcatttggg 960 ctttgatgaa ggcacctctc ttgattggtt gtgatgtaag aaacatgacc gctgaaactt 1020 tggagatttt gagtaataag gagattatcg ctgttaacca agacccactt ggtgttcaag 1080 gaaggaaaat tcaagccaat ggagaaaatg attgtcagca ggtgtggtca ggacctttat 1140 ctggtgaccg tatggtagtt gctctctgga accgttgctc tgagccagca actattacag 1200 catcatggga tatgatcggt cttgaatcta ccattagcgt ttcagtaaga gatttgtggc 1260 agcacaaaga tgtaacagag aatacttctg gctcctttga agctcaagtt gacgcacacg 1320 actgtcatat gtacgttctc actccccaga cagtatcaca ctctgatgta tagttcttta 1380 ttgtgaggca ttcaaatccc aaagaacaga gattgccttt gtgtttctgt atactcgtgt 1440 atcttgtaaa acgtgaaacc tgttgttacc cggacaactt taaatgtttg tcactctcta 1500 aaaaaaaaaa ataaaaaaaa aaaaaaa 1527 // |
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