EBI Dbfetch

ID   AY072629; SV 1; linear; mRNA; STD; PLN; 1026 BP.
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AC   AY072629;
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DT   22-JAN-2002 (Rel. 70, Created)
DT   22-JAN-2002 (Rel. 70, Last updated, Version 1)
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DE   Arabidopsis thaliana AT5g33290/F19N2_10 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1026
RA   Kim C.J., Chen H., Cheuk R., Meyers M.C., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1026
RA   Kim C.J., Chen H., Cheuk R., Meyers M.C., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (08-JAN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Kim,C.J., Chen,H.,
CC   Cheuk,R., Meyers,M.C., Shinn,P., Banh,J. Bowser,L., Chang,E.,
CC   Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C.,
CC   Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W.,  Theologis,A.,
CC   and Ecker,J.R.
CC   Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1026
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /mol_type="mRNA"
FT                   /clone="U13283"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1026
FT                   /codon_start=1
FT                   /product="AT5g33290/F19N2_10"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q94AA9"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q94AA9"
FT                   /protein_id="AAL62020.1"
FT                   /translation="MMNRFKVWTYTEGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSR
FT                   SRFRADRPENAHVFFIPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKHPY
FT                   WNRSQGGDHFMVSCHDWAPDEIDGNPKLFEKFIRGLCNANTSEGFRPNVDVSIPEIYLP
FT                   KGKLGPSFLGKSPRVRSILAFFAGRSHGEIRKILFQHWKEMDNEVQVYDRLPPGKDYTK
FT                   TMGMSKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFSIQIPVSR
FT                   IKEIKTILQSVSLVRYLKMYKRVLEVKQHFVLNRPAKPYDVMHMMLHSIWLRRLNLRLG
FT                   T"
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SQ   Sequence 1026 BP; 285 A; 210 C; 248 G; 283 T; 0 other;
     atgatgaatc gttttaaggt gtggacatac acagagggag aggtcccatt gttccatgac        60
     ggccctgtga atgacattta cggcatagaa ggacaattca tggacgaaat gtgcgtggac       120
     ggaccgaaga gtagaagccg ttttcgggca gatcgacccg agaatgctca tgttttcttc       180
     ataccattta gcgtcgccaa ggtcatccac ttcgtctaca agcccatcac ctctgtcgaa       240
     gggttttcgc gggctcgcct acaccgcctt atagaggatt atgttgatgt agttgctact       300
     aagcatccat attggaaccg aagccaagga ggcgaccatt tcatggtatc atgccatgac       360
     tgggcaccag acgagattga tgggaatcca aagttgtttg aaaaattcat taggggactt       420
     tgcaatgcta acacctcgga aggtttccga cctaacgtgg acgtatccat tccggagatc       480
     taccttccta aaggtaaatt gggtccgtct tttctcggga aatcaccgcg agttcgatct       540
     atactcgcat ttttcgctgg aagaagtcac ggtgaaatcc gaaaaatctt atttcaacat       600
     tggaaagaaa tggacaatga agtccaagtc tatgatcgtc ttccgccagg aaaagactat       660
     acaaaaacta tgggaatgag taagttttgt ctgtgtccga gtggttggga ggtcgctagc       720
     ccgagggagg tcgaggcgat atatgctggt tgtgtaccag tgatcatatc ggataattat       780
     tcattaccat tcagtgatgt gctgaattgg gattccttct ccatacaaat ccctgtttct       840
     aggataaaag agatcaaaac cattctacaa agtgtctctc tcgtaagata cttgaagatg       900
     tataagagag ttttagaagt gaagcagcat ttcgtgttga atcgtccagc taaaccctac       960
     gatgtgatgc atatgatgct tcattcgatc tggttaagac gacttaatct taggcttggt      1020
     acatag                                                                 1026
//