spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY072013; SV 1; linear; mRNA; STD; PLN; 2029 BP.
XX
AC   AY072013;
XX
DT   08-JAN-2002 (Rel. 70, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Arabidopsis thaliana AT5g05730/MJJ3_14 mRNA sequence.
XX
KW   FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-2029
RA   Cheuk R., Chen H., Kim C.J., Meyers M.C., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis cDNA clones";
RL   Unpublished.
XX
RN   [2]
RP   1-2029
RA   Cheuk R., Chen H., Kim C.J., Meyers M.C., Banh J., Bowser L., Carninci P.,
RA   Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (19-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
XX
DR   GOA; P32068.
DR   InterPro; IPR005256; Anth_synthI.
DR   InterPro; IPR005801; ADC_synthase.
DR   InterPro; IPR006805; Anth_synth_I_N.
DR   InterPro; IPR015890; Chorismate-bd_C.
DR   InterPro; IPR019999; Anthranilate_synth_I_C.
DR   UniProtKB/Swiss-Prot; P32068; TRPE_ARATH.
XX
CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Cheuk,R., Chen,H.,
CC   Kim,C.J., Meyers,M.C., Shinn,P., Banh,J. Bowser,L., Dale,J.M.,
CC   Goldsmith,A.D., Jiang,P.X., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Nguyen,M., Onodera,C.S.,
CC   Palm,C.J., Pham,P.K., Quach,H.L., Southwick,A., Tang,C.C.,
CC   Toriumi,M., Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W.,
CC   Theologis,A., and Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2029
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL09-88-H10(R21329)"
FT                   /note="ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   misc_difference 268
FT                   /replace="c"
FT                   /note="compared to genome"
XX
SQ   Sequence 2029 BP; 562 A; 410 C; 491 G; 566 T; 0 other;
     actaatcaaa tttactcatt tagccgtcac ctctgaatct tcttctccga tcttcaaaca        60
     ttccggccgc caccgagttc ttagccgtta caatgtcttc ctctatgaac gtagcgacga       120
     tgcaagcact gactttctct cgccggcttc tcccttctgt tgcttctcgt tatctctctt       180
     cttcttctgt gaccgttact ggatactccg gtagaagctc ggcttacgcg ccttctttcc       240
     gttcgattaa atgcgtctct gtttctcggg aagcttcaat agtaagtgat acaaagaagt       300
     tggcagatgc ttctaagagt acaaacctta taccaattta ccgctgtata ttctctgatc       360
     agcttactcc tgttcttgct taccgttgtt tggtcaaaga agatgaccgt gaagctccta       420
     gctttctttt cgagtccgtt gagcctggtt ctctcctggc tagcgttggt cgttatagcg       480
     ttgttggggc tcagcctgcg atggagatcg tggcaaagga gaataaagtt attgtaatgg       540
     atcacaacaa tgaaaccatg actgaggaat tcgtcgaaga tccaatggag atcccaagaa       600
     aaatctctga gaaatggaac cctgatcctc aactagttca ggaccttcca gatgcgtttt       660
     gtggtgggtg ggttggtttt tttctcgtac gacactgttc gttatgttga gaagaggaaa       720
     ttgccatttt caaaggcccc tgaggatgat aggaacttgc cagacatgca tcttggtctg       780
     tacgacgatg tagttgtatt tgatcacgtg gaaaagaaag catatgtcat tcactggatt       840
     agactagatg ggagccttcc ttacgaaaag gcatacagta atggaatgca acatttggag       900
     aacttggtgg ccaagttaca tgatattgag ccgccaaaac tggctgcagg taacgtgaat       960
     cttcagacac gacaatttgg gccatctttg gataattcaa acgtgacatg cgaagagtac      1020
     aaggaggctg tggtcaaggc caaagaacat atacttgcag gagacatatt tcagatcgtg      1080
     ctgagtcaac gttttgagcg gcgaacattt gcagacccct ttgaagttta tagagcacta      1140
     agagttgtga atccaagtcc gtatatgggt tatttgcagg ctagaggatg cattttggta      1200
     gcatcaagtc cagaaattct caccaaagta aagcagaaca agatagtgaa tcggccattg      1260
     gcaggaacca gcaagagagg gaagaatgaa gttgaggata agagattaga aaaggaactg      1320
     ctagagaatg aaaagcaatg tgctgagcac atcatgttgg ttgatctcgg tcgcaacgat      1380
     gttggaaagg ttacgaaata cggatcagtg aaagtagaga agcttatgaa catcgaacgt      1440
     tattcccatg ttatgcatat aagctccacg gtgacaggag aattacaaga tggtttgact      1500
     tgctgggacg tactacgtgc ggctttacca gtgggaacag ttagtggtgc accaaaggtc      1560
     aaagctatgg aactaatcga tgagctagag ccaacgaggc gtggaccata cagtggcggt      1620
     tttggtggag tctccttcac tggtgacatg gacattgctt tatcccttag gacaatcgtt      1680
     tttccgacag catgtcaata caatacaatg tactcttaca aggatgctaa caaacggcgt      1740
     gagtgggtgg cttatcttca agctggagct ggtgtagtag ctgatagtga cccgcaagac      1800
     gaacactgtg agtgccagaa caaagccgct ggtcttgctc gagccatcga cttggctgaa      1860
     tctgcatttg tgaaaaaatg attgtgccca agaacagagg ctggctttct ttgaactccg      1920
     agttcatgtg tataaaacag ttacaagcag aacaaagttt tttctttttc ttgattttgt      1980
     gagaattgca attagactcc attaatgaag ctctgaaaaa tgttacaac                  2029
//
spacer
spacer