spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY071600; SV 1; linear; mRNA; STD; INV; 1373 BP.
XX
AC   AY071600;
XX
DT   22-DEC-2001 (Rel. 70, Created)
DT   22-DEC-2001 (Rel. 70, Last updated, Version 1)
XX
DE   Drosophila melanogaster RE65123 full length cDNA.
XX
KW   FLI_CDNA.
XX
OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
XX
RN   [1]
RP   1-1373
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
XX
CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1373
FT                   /organism="Drosophila melanogaster"
FT                   /map="77A3-77A3"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             43..1302
FT                   /codon_start=1
FT                   /gene="CG7290"
FT                   /product="RE65123p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0036949"
FT                   /db_xref="GOA:Q9VW91"
FT                   /db_xref="InterPro:IPR002557"
FT                   /db_xref="UniProtKB/TrEMBL:Q9VW91"
FT                   /protein_id="AAL49222.1"
FT                   /translation="MGGQKATILAAVALVIACAAPAIADVNVTALCLLVSNGNYVASQS
FT                   DCSTYYQCQGSSFTAMSCPQGYYFDKNAQQCTGTVPSTCTSNSDPCLGKAVGSFAASSS
FT                   SCGGYYYCGASGAVRGNCPAGENFNPTTMACVYKNNYPCSESAGDGSTVSVALNLCNLV
FT                   KNGFYFGSPSDCSGWNFCQDNVLHSGSCEDGLVFNVQASNCGYKMASSCAQVTNDPSLT
FT                   GVSAPTTCSSSGATIAATACNQYYLCSAGNYQLMTCPSGYYYDTISKACVTRMEARNDC
FT                   DRCVGTTATFVNAYSATNCSDYLYCVNGVQKAVESCPTNYYFNENLGSCVNGLEPKFLC
FT                   CNPTQSDGTSTSSSGSTSSGSTSSGSTSSGSTSSGSTSSGSTSSGSTSSGSTSSGSTSS
FT                   GSTSSGTSSTTSTGTSSDKK"
XX
SQ   Sequence 1373 BP; 321 A; 422 C; 333 G; 297 T; 0 other;
     aaacagtatt caactaggag ccaccaaaag aagaagcaaa taatgggtgg acaaaaagca        60
     accatcctcg ctgccgtggc gctggtgatc gcctgtgccg ctccagcaat agccgatgtg       120
     aatgtcaccg ccttgtgcct gctggtcagc aatgggaact acgtggccag ccagtcggac       180
     tgctcgacct actaccagtg ccagggatcc tcgttcacgg ccatgtcctg tccccagggc       240
     tactacttcg acaagaatgc ccagcagtgc acgggcactg tgccgagcac ctgcaccagc       300
     aactccgatc cctgtctggg caaggcggtg ggatccttcg cggcatccag ttcgtcctgc       360
     ggcggctact actactgcgg agcctccggc gctgtgaggg gcaattgtcc tgccggcgag       420
     aacttcaatc ccaccacaat ggcctgtgtg tacaagaaca actatccatg cagcgagtcc       480
     gccggtgatg gctccactgt gtcggtcgcc ctcaacctat gcaatcttgt caagaatggc       540
     ttttactttg gaagcccttc cgactgcagt ggctggaact tctgccagga caacgttctg       600
     cactcgggat cctgcgaaga tggtctagta ttcaatgtgc aggccagcaa ctgcggctac       660
     aagatggcct catcctgcgc ccaggtcacc aatgatccat ccctgaccgg agtgtctgct       720
     ccgaccacat gctcctcgtc gggagcaacg atcgcagcca ccgcgtgcaa ccagtactac       780
     ctgtgctccg ccggcaacta tcagctgatg acctgcccct cgggatacta ctatgatacc       840
     atctcgaagg cgtgtgtgac caggatggaa gcgaggaacg actgcgacag atgtgtgggc       900
     accactgcga cctttgtaaa cgcctactcg gcaaccaatt gctctgatta cctatactgc       960
     gtgaacggcg ttcagaaggc cgtggagagc tgccccacca actactactt caacgagaac      1020
     ctcggatcct gcgtaaacgg gttggagccc aagttcctct gctgcaatcc cacgcaaagc      1080
     gatggaactt cgacgtcttc ctctggttcg acttcctcgg gctcgacttc ctccggatcg      1140
     acttcctctg ggtcaacttc ctccggctcg acttcctctg gctcgacttc ctcgggctcg      1200
     acttcctctg gctcgacttc ctcgggctcg acttcctccg gctcgacttc ctctggaact      1260
     tcatccacaa cctctactgg aacaagttca gacaaaaaat aatttaaata gcatttatgc      1320
     caaaaataat aaatacaaat caagtttggc aactcagaaa aaaaaaaaaa aaa             1373
//
spacer
spacer