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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY070679; SV 1; linear; mRNA; STD; INV; 536 BP.
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AC   AY070679;
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DT   22-DEC-2001 (Rel. 70, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Drosophila melanogaster RH17440 full length cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-536
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..536
FT                   /organism="Drosophila melanogaster"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             11..469
FT                   /codon_start=1
FT                   /product="RH17440p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0029765"
FT                   /db_xref="GOA:Q9W4C2"
FT                   /db_xref="HSSP:1GD6"
FT                   /db_xref="InterPro:IPR001916"
FT                   /db_xref="InterPro:IPR019799"
FT                   /db_xref="UniProtKB/TrEMBL:Q9W4C2"
FT                   /protein_id="AAL48150.1"
FT                   /translation="MRAAPFGSWYWLGLGLGLLLAIECGVVSAKRFLRCELARKLLDQH
FT                   GFERSLLSNWICLLEHESDLDTGRITTNANGSRNYGLFQINGRFCQEGRRGGICNAKCE
FT                   DFLDENLRESVTCAKRIQTSDGFRHWAGWQRYCRNAQNLPNLKVICGI"
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SQ   Sequence 536 BP; 142 A; 105 C; 146 G; 143 T; 0 other;
     gagtcgcaat atgagagctg cgccattcgg atcgtggtac tggctgggat tgggattggg        60
     cctgcttctg gccatcgagt gcggcgtggt ttccgccaag cgtttcctgc gctgtgaact       120
     ggcccgcaag ttgctcgatc agcatggttt cgaacgcagt ctgctctcga attggatttg       180
     tttgctagag cacgaaagcg atctggatac cggcaggatt acaaccaatg cgaatggatc       240
     tcggaactat gggctgttcc aaatcaatgg caggttttgt caggagggaa ggcgtggcgg       300
     catttgcaat gccaagtgcg aagatttttt ggacgaaaat ttaagggagt cggttacttg       360
     cgccaagcgc atccaaacct cggatggttt tcgtcattgg gcgggatggc aacgatattg       420
     ccgaaacgcc caaaatctgc ctaatcttaa ggttatctgt gggatctaga tgtaattaat       480
     ttaatgattt caatttgtaa caaataaata ttatatatgc aaaaaaaaaa aaaaaa           536
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