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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY065071; SV 1; linear; mRNA; STD; PLN; 1502 BP.
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AC   AY065071;
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DT   12-DEC-2001 (Rel. 70, Created)
DT   12-DEC-2001 (Rel. 70, Last updated, Version 1)
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DE   Arabidopsis thaliana unknown protein (At4g01750; T15B16.9) mRNA, complete
DE   cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1502
RA   Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J.,
RA   Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K.,
RA   Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X.,
RA   Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (03-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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DR   EMBL-TPA; BK005830.
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CC   e-mail for correspondence: arab@sequence.stanford.edu
CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Nguyen,M.,
CC   Southwick,A., Karlin-Neumann,G.,  Lam,B., Miranda,M., Palm,C.J.,
CC   Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R., Chung,M.K.,
CC   Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H., Shinn,P.,
CC   Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
CC   Nguyen,M, (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed
CC   equally to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford)  contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1502
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="IV"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL07-12-K16"
FT                   /note="This clone is in pBluescript ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             173..1276
FT                   /codon_start=1
FT                   /gene="At4g01750; T15B16.9"
FT                   /product="unknown protein"
FT                   /db_xref="GOA:Q9ZSJ0"
FT                   /db_xref="InterPro:IPR003388"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ZSJ0"
FT                   /protein_id="AAL38247.1"
FT                   /translation="MAQKQQTLHQQRPFSSSPRSYSSISNRPIFLLSRNGLLLVLLALF
FT                   LLLGVFLPWPGSPLLLFPNKVSSPSYASSLSPHAKSEWRNYTLAQAAKFVATNGTVIVC
FT                   AVSSPFLPFLNNWLISVSRQKHQEKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTA
FT                   YSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQDPFQYLEGSHDAYFTDDMP
FT                   QIKPLNHSHDLPAPDQNGETYICSCMIYLRPTNGAKLLMKKWSEELQSQAWSESIRFKA
FT                   NDQPAFNLALNKTAHQVDLYLLSQVAFPTGGLYFNDAAWVKETKGKHVIVHNNYIIGYD
FT                   RKMRRFQDYGLWLVDDHALESPLGKLQ"
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SQ   Sequence 1502 BP; 404 A; 327 C; 296 G; 475 T; 0 other;
     gatgaagaag ttcacgatag ctaggtatta tacaagttta attaatttcg tgtgtgctac        60
     ttaaagtgct acgaagaaac tttgactttt ctaatatata tttctctatc ttgaatccga       120
     ttcaagcttg tgaaagtctc tctgcaaatc ttgttgctct gttgctacaa caatggcgca       180
     gaaacaacag acccttcacc aacaacgacc attctcttct tctcctcgtt cttattcttc       240
     aatctcaaac cgtcccatct ttctccttag ccgcaacggt ctcctccttg tccttctcgc       300
     tctcttcctt ctcctcggtg tattcttacc ttggcccgga tctcctttgt tgctatttcc       360
     gaacaaagtc tcttctcctt cttatgcttc ttctttgtct ccgcatgcca aatctgaatg       420
     gcgtaactat acccttgctc aggcagctaa gtttgtcgcc acgaacggca ctgtgatcgt       480
     ctgcgccgtg agctcaccat tcttgccttt tctcaacaac tggttgatta gtgtttctag       540
     acagaagcat caagaaaaag tccttgtgat cgctgaggat tacattactc tgtataaagt       600
     caacgaaaag tggcctggcc acgccgttct tattcctcca gcgctcgatt ctaaaaccgc       660
     atacagtttc ggttcccagg gtttcttcaa cttcacagct cgaaggccac aacatctctt       720
     gcaaattttg gagctaggtt acaatgttat gtacaacgat gttgatatgg tttggttgca       780
     agatccattt cagtatttgg agggaagcca tgacgcgtac tttacggatg atatgcctca       840
     aataaagcct ttgaatcact ctcatgattt accagcgccg gatcaaaacg gagagactta       900
     tatatgtagc tgcatgattt acttgcgacc cacgaatggt gcaaagcttc taatgaagaa       960
     atggagtgag gaacttcagt cccaagcttg gtctgagtcc atccgtttta aagcaaatga      1020
     tcagcctgct tttaacttgg cacttaacaa aacagcccat caagtggatc tctacttgct      1080
     ttctcaggta gcttttccaa caggaggatt gtatttcaat gatgcggcat gggttaaaga      1140
     gacaaagggg aaacatgtca tagtccacaa taactacatt atcggttacg ataggaaaat      1200
     gagacggttc caagattatg gtctatggct agtcgatgat catgctctcg agtctccatt      1260
     agggaaattg cagtaaattc gaatggctaa agaaagatag atccattgag taaattcctt      1320
     agaacttttt gggatcttta aaggtatgcg tgagtgttat attacatatg actaattcat      1380
     tatgacttga gttttgttaa tccagttgta atgtttagta gaaacagagg aaaacagggt      1440
     ccagttgtac attttggtct tgagtaaaca aatgagattc aagatgtatg tcttgacgtt      1500
     at                                                                     1502
//
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