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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY064135; SV 1; linear; mRNA; STD; PLN; 1586 BP.
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AC   AY064135;
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DT   09-DEC-2001 (Rel. 70, Created)
DT   09-DEC-2001 (Rel. 70, Last updated, Version 1)
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DE   Arabidopsis thaliana At1g08660/F22O13_14 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1586
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Banh J.,
RA   Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D.,
RA   Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G.,
RA   Kawai J., Lam B., Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M.,
RA   Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M.,
RA   Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y.,
RA   Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Arabidopsis cDNA clones";
RL   Unpublished.
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RN   [2]
RP   1-1586
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Banh J.,
RA   Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D.,
RA   Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G.,
RA   Kawai J., Lam B., Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M.,
RA   Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M.,
RA   Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y.,
RA   Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (27-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Shinn,P., Chen,H.,
CC   Cheuk,R., Kim,C.J., Koesema,E., Meyers,M.C., Banh,J. Bowser,L.,
CC   Chang,E., Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G.,
CC   Lam,B., Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S.,
CC   Palm,C.J., Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M.,
CC   Wu,H.C., Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W.,
CC   Theologis,A., and Ecker,J.R.
CC   Shinn,P. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1586
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL09-20-F12(R21103)"
FT                   /note="ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             87..1511
FT                   /codon_start=1
FT                   /product="At1g08660/F22O13_14"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q8VZJ0"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="UniProtKB/TrEMBL:Q8VZJ0"
FT                   /protein_id="AAL36042.1"
FT                   /translation="MRSHQAGRKLPLLQLLGCVAVFSVFVFTIQSSFFADNNRKLDLQP
FT                   EDIQILSDFQSSVQQCVANRGLGLSAHIIDHCNLILKFPEGTNSTWYNAQFKVFEALEF
FT                   KYNVCEAVLLWEQYRNMTTVLTREYLDVRPDGWLDYAAMRIAQLGADKCYNRTLCEEHL
FT                   NVILPAKPPFHPRQFHKCAVVGNSGDLLKTEFGEEIDSHDAVFRDNEAPVNEKYAKYVG
FT                   VKRDFRLVVRGAARNMIKILNGSDNEVLIIKSVTHRDFNEMIKRIPNPVYLFQGIVLRR
FT                   GAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSTPRKGHNPLQGRAYYQLLEC
FT                   LGVIRIHSPMRSERKEDWSSVPSREMISRAHTAALRLQRSQQPTSSKRDGSGQFGNCKV
FT                   WGDADPTKGPVSGSPDMSETRKKSNYKKWEVMPFRSLRKEARDHYIQMKGVSQYKMDGN
FT                   KLDDLVCVRHPLKLDT"
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SQ   Sequence 1586 BP; 454 A; 322 C; 372 G; 438 T; 0 other;
     gagtttcttg gatcatcaca ctcacctgct tcgttactct tcccttggat tggattggat        60
     tggattcgct ctttcatggt tgaagaatga gatctcacca agctggccgc aaacttccgc       120
     ttcttcaact tctcggctgc gtcgctgttt tctccgtttt cgttttcacc atccaatctt       180
     ccttcttcgc agataataat cgtaaactag atcttcagcc ggaagatatc cagatcttgt       240
     cagattttca gtccagcgtt caacagtgcg tggctaacag agggcttgga ctctctgccc       300
     atattatcga tcactgtaat cttatcctca agttccctga aggcactaac agtacttggt       360
     acaatgcaca atttaaagtt tttgaagcat tggagttcaa gtataatgtt tgtgaggcag       420
     ttctcttatg ggagcagtac cgcaatatga ctacagtatt gacaagagaa tacctcgatg       480
     tacgccctga tgggtggttg gactacgcag ctatgagaat tgcacagttg ggagctgata       540
     agtgttataa tcgtacattg tgtgaagagc atcttaatgt gattcttcca gcgaagcctc       600
     cttttcaccc acggcagttt cataaatgcg ctgttgttgg aaattctgga gatctgttaa       660
     aaacagagtt cggagaagag attgacagtc atgatgctgt atttcgagac aatgaagctc       720
     ctgtcaatga gaagtatgcc aagtacgtag gagtgaaaag ggatttccga ctagttgttc       780
     gtggtgcagc tcgtaacatg attaagattc tcaatgggtc tgacaatgaa gtgcttataa       840
     taaaaagtgt gacccaccga gacttcaatg aaatgataaa gcgtatacca aaccctgttt       900
     atcttttcca aggaattgtc ctacgcagag gtgccaaagg aaccgggatg aaatccattg       960
     aactagcatt gtccatgtgc gatattgttg acatatatgg tttcactgtt gatcctggat      1020
     acacagagtg gacgcgttac ttttccacgc caaggaaagg gcacaaccca cttcaaggaa      1080
     gggcatacta ccaacttcta gagtgtcttg gtgtaatacg gatccattct cccatgagat      1140
     ccgagagaaa ggaggactgg tcaagtgtgc caagtcgtga aatgataagc agagctcaca      1200
     cagctgcctt acgcctacaa aggagccaac agccaactag ttcgaagagg gatgggtcag      1260
     gacaattcgg taattgcaag gtgtggggcg atgcagaccc tacaaaagga cctgtctcgg      1320
     gatctccgga catgagtgag accaggaaga agtcaaatta caagaaatgg gaagtgatgc      1380
     cgtttaggag cttaagaaag gaagctaggg atcactatat ccaaatgaaa ggcgtgtcac      1440
     agtataagat ggatggaaat aagctggacg atctggtttg cgtgaggcat ccactgaaat      1500
     tagatacgta aattttttta tcatcttgta aaggttcaat ttcaataaca tcttgagctt      1560
     acaaagtaaa ggttcctaca tttcac                                           1586
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