spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY062706; SV 1; linear; mRNA; STD; PLN; 1521 BP.
XX
AC   AY062706;
XX
DT   27-NOV-2001 (Rel. 69, Created)
DT   27-NOV-2001 (Rel. 69, Last updated, Version 1)
XX
DE   Arabidopsis thaliana pectinacetylesterase (At5g23870; MRO11.9) mRNA,
DE   complete cds.
XX
KW   FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1521
RA   Southwick A., Karlin-Neumann G., Nguyen M., Lam B., Miranda M., Palm C.J.,
RA   Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K.,
RA   Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X.,
RA   Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (14-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
XX
CC   e-mail for correspondence:  arab@sequence.stanford.edu
CC   RIKEN Genomic Sciences Center (GSC) members  carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : ''RIKEN
CC   Arabidopsis  Full-Length cDNA''): Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M.,  Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
CC   Hayashizaki,Y. and  Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out  the
CC   sequencing and annotation of the RAFL cDNAs: Nguyen,M.,
CC   Southwick,A.,  Karlin-Neumann,G.,  Lam,B., Miranda,M., Palm,C.J.,
CC   Bowser,L., Jones,T.,  Banh,J., Chen,H., Cheuk,R., Chung,M.K.,
CC   Kim,C., Lin,J., Liu,S.X., Pham,P.K.,  Sakano,H., Shinn,P.,
CC   Yamada,K., Ecker,J., Theologis,A. and  Davis,R.W.
CC   Southwick,A., (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed
CC   equally to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford)  contributed equally to this work as PIs.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1521
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="V"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL09-06-B14"
FT                   /note="This clone is in pBluescript ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             778..1404
FT                   /codon_start=1
FT                   /gene="At5g23870; MRO11.9"
FT                   /product="pectinacetylesterase"
FT                   /db_xref="InterPro:IPR004963"
FT                   /db_xref="UniProtKB/TrEMBL:Q8W4A4"
FT                   /protein_id="AAL32784.1"
FT                   /translation="MSDAGFFLDAIDVAANRTMRSFYSQLVSLQGIQKNLDPSCTHAFF
FT                   PEPSLCFFPQYVLRFIKTPFFILNSAYDVFQFHHGLVPPSADQTGRWNRCKLNVTACNP
FT                   HQLDALQGFRKDMLGALMNFFRNSTRGGMFINSCFDHCQSALEETWLSPTSPRINNKTI
FT                   AETVGDWYFGRGEEAKEIGCPYPCDKTCHNLIPASTSDFLVNLDI"
XX
SQ   Sequence 1521 BP; 419 A; 327 C; 306 G; 469 T; 0 other;
     aaatgaatta ctttccacaa aatctttatt atctataaat actataaacc tttccatttc        60
     cctcttaaat ccccaaatca attattttcc tttgatacaa caggcataga actcaacgac       120
     gccgttttca ttcccagtct ccttctttca ccattgaagc gtccaaaact gtaacaatga       180
     agacgacgac tcggctcctc gatctaacag cggctatggt tctagttgtc tacgtgtctt       240
     tctctcctcc gcttgtttcc ggcgaaccag ggcggcgtgt tagcatgaca ctggttcgag       300
     acgccgctgc tctcggtgct ttttgcttgg acggaagctt accggcgtat catttagaca       360
     gagggtttgg tgctggatca aacaattgga ttttgcagtt tgagggagga ggatggtgca       420
     atgatatagc atcatgtgtg gaaagagcca agacccgtcg aggctcgaca cgttatatga       480
     gcaagaccgt cgtcttcact ggagtcttga gcaataacgc ctctcaaaat ccagattttt       540
     acaactggaa caaagtcagg ctaaggtatt gcgacggagc ttcatttgcg ggagattcac       600
     aatttggcaa cgggaggaca acgaatatgg aatgccatta ttcttgacct tctccccaaa       660
     ggtttagcaa aagcccacaa ggctcttcta accggttgtt cagctggtgg tttgtctaca       720
     tttttgcatt gtgacaattt cacgagctat ttacccaaaa acgcaagcgt taagtgcatg       780
     agcgatgctg gattctttct tgacgcaatc gatgtagcag caaaccggac aatgagatct       840
     ttttactcac agcttgtgtc tctacagggt atacaaaaaa acctcgatcc aagttgcaca       900
     cacgcatttt tccccgaacc atctctgtgt tttttcccgc aatacgtatt gcgatttatc       960
     aaaacgccat ttttcatctt aaattcagcc tacgatgtat ttcagttcca tcatggactg      1020
     gttccacctt ctgctgatca aaccggacgt tggaaccgtt gtaagcttaa tgtgacggca      1080
     tgtaatccac accaactcga tgcactacaa gggtttagga aagatatgtt gggagcttta      1140
     atgaatttct tcagaaattc tacgagagga ggaatgttta taaactcatg ctttgatcat      1200
     tgtcaaagtg ctttagagga gacttggctc tctcccacat caccaagaat caacaataag      1260
     acaattgctg agacggtcgg agattggtat tttgggagag gagaagaagc gaaagaaatt      1320
     ggttgtccat atccatgtga taaaacatgt cataatctca ttccagcttc tacttcagat      1380
     tttttggtaa atctagatat ttaacatctt cttcaattac agtttgctat agttaattac      1440
     attatttttt ccgcataatt cactgtaaag attcgattaa ttccagttaa agttgtgtag      1500
     ttatatgttt ttcttttgtt a                                                1521
//
spacer
spacer