EBI Dbfetch

ID   AY061898; SV 1; linear; mRNA; STD; PLN; 1131 BP.
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AC   AY061898;
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DT   20-NOV-2001 (Rel. 69, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Arabidopsis thaliana AT4g17090/dl4575c mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1131
RA   Kim C.J., Chen H., Cheuk R., Koesema E., Meyers M.C., Banh J., Bowser L.,
RA   Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y.,
RA   Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B.,
RA   Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S.,
RA   Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A.,
RA   Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S.,
RA   Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1131
RA   Kim C.J., Chen H., Cheuk R., Koesema E., Meyers M.C., Banh J., Bowser L.,
RA   Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y.,
RA   Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B.,
RA   Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S.,
RA   Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A.,
RA   Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S.,
RA   Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (30-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Kim,C.J., Chen,H.,
CC   Cheuk,R., Koesema,E., Meyers,M.C., Shinn,P., Banh,J. Bowser,L.,
CC   Chang,E., Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G.,
CC   Lam,B., Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S.,
CC   Palm,C.J., Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M.,
CC   Wu,H.C., Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W.,
CC   Theologis,A., and Ecker,J.R.
CC   Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1131
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /mol_type="mRNA"
FT                   /clone="U13698"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1131
FT                   /codon_start=1
FT                   /product="AT4g17090/dl4575c"
FT                   /note="probable beta-amylase"
FT                   /db_xref="GOA:Q941A5"
FT                   /db_xref="HSSP:1BYB"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q941A5"
FT                   /protein_id="AAL31225.1"
FT                   /translation="MELTLNSSSSLIKRKDAKSSRNQESSSNNMTFAKMKPPTYQFQAK
FT                   NSVKEMKFTHEKTFTPEGETLEKWEKLHVLSYPHSKNDASVPVFVMLPLDTVTMSGHLN
FT                   KPRAMNASLMALKGAGVEGVMVDAWWGLVEKDGPMNYNWEGYAELIQMVQKHGLKLQVV
FT                   MSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGCDSVPVLRGR
FT                   TPIQVYSDFMRSFRERFEGYIGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQ
FT                   CYDKYMKSSLQAYAESIGKTNWGTSGPHDAGEYKNLPEDTEFFRRDGTWNSEYGKFFME
FT                   WYSGKLLEHGDQLLSSAKGIFQGSGAKLSGKVAGIH"
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SQ   Sequence 1131 BP; 347 A; 238 C; 289 G; 257 T; 0 other;
     atggaattga cactgaattc ctcgagttct cttatcaaac gtaaagatgc caagagttct        60
     agaaaccaag aaagttcctc caacaacatg acctttgcga agatgaagcc gccaacatat       120
     caattccaag caaagaactc ggttaaggaa atgaagttca ctcacgagaa gaccttcacg       180
     ccagaaggtg aaacccttga gaaatgggag aagctccacg ttctctcata cccacactcc       240
     aagaacgacg ctagcgttcc ggtgttcgtc atgttaccgc tcgacacagt aacaatgtca       300
     gggcatttga acaaaccacg agccatgaac gctagtttga tggccctgaa aggagctggt       360
     gtggaaggtg tgatggtgga tgcttggtgg ggattggtgg agaaagatgg acctatgaat       420
     tataactggg aaggctatgc cgagcttata cagatggttc aaaagcacgg tctcaaactc       480
     caggtcgtta tgtcattcca tcaatgtgga ggaaacgtag gagactcttg cagtatcccc       540
     ttgcctccat gggtgcttga agagatcagc aagaaccctg atcttgtcta cacagacaaa       600
     tctgggagaa ggaaccctga atatatctcc ttgggatgtg attctgtgcc tgtcctaaga       660
     ggaagaacac ctatccaggt ctactcagat ttcatgagga gcttccgtga acgatttgaa       720
     ggctacatag gaggagttat tgcggaaatt caagtaggaa tgggaccttg tggagaattg       780
     agatacccat cataccctga gagcaacggg acctggagat tccccggaat tggagagttc       840
     cagtgctacg acaagtatat gaaatcgtca cttcaagcat atgctgagtc aatcgggaaa       900
     actaactggg gaacaagtgg acctcatgat gccggcgagt acaagaacct cccagaagat       960
     actgaatttt tcaggagaga cggaacatgg aatagcgagt atggaaagtt tttcatggaa      1020
     tggtactccg ggaagctgct agaacatgga gaccaactcc tatcttcagc gaaaggtatc      1080
     tttcaaggaa gcggagcaaa gctatcagga aaggtagctg gaattcacta g               1131
//