 |
|
EBI DbfetchID AY061417; SV 1; linear; mRNA; STD; INV; 2189 BP. XX AC AY061417; XX DT 14-NOV-2001 (Rel. 69, Created) DT 14-NOV-2001 (Rel. 69, Last updated, Version 1) XX DE Drosophila melanogaster LD34806 full length cDNA. XX KW FLI_CDNA. XX OS Drosophila melanogaster (fruit fly) OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; OC Drosophilidae; Drosophila; Sophophora. XX RN [1] RP 1-2189 RA Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., RA Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., RA Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J., Pacleb J., RA Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., RA Rubin G.M., Celniker S.; RT ; RL Submitted (30-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, RL One Cyclotron Road, Berkeley, CA 94720, USA XX CC Sequence submitted by: CC Berkeley Drosophila Genome Project CC Lawrence Berkeley National Laboratory CC Berkeley, CA 94720 CC This clone was sequenced as part of a high-throughput process to CC sequence clones from Drosophila Gene Collection 1 (Rubin et al., CC Science 2000). The sequence has been subjected to integrity checks CC for sequence accuracy, presence of a polyA tail and contiguity CC within 100 kb in the genome. Thus we believe the sequence to CC reflect accurately this particular cDNA clone. However, there are CC artifacts associated with the generation of cDNA clones that may CC have not been detected in our initial analyses such as internal CC priming, priming from contaminating genomic DNA, retained introns CC due to reverse transcription of unspliced precursor RNAs, and CC reverse transcriptase errors that result in single base changes. CC For further information about this sequence, including its location CC and relationship to other sequences, please visit our Web site CC (http://fruitfly.berkeley.edu) or send email to CC cdna@fruitfly.berkeley.edu. XX FH Key Location/Qualifiers FH FT source 1..2189 FT /organism="Drosophila melanogaster" FT /strain="y; cn bw sp" FT /mol_type="mRNA" FT /db_xref="taxon:7227" FT misc_feature 1..2170 FT /note="blastn alignment with AE003639" FT CDS 115..1578 FT /codon_start=1 FT /product="LD34806p" FT /note="Longest ORF" FT /db_xref="FLYBASE:FBgn0051849" FT /db_xref="GOA:Q95RF3" FT /db_xref="InterPro:IPR013032" FT /db_xref="UniProtKB/TrEMBL:Q95RF3" FT /protein_id="AAL28965.1" FT /translation="MVRSTFLATYNQTPVAGVGRLAITKKLVLWLVLVLQVGFIGCIWL FT LQMSRGQESQQRSAMDQLGGRVNFVASGEAPMEKMALVGGTHCPHLQENVNRYDKDFYQ FT MKPERLNESHLPDYNVPAYVDAEMGLTPNLWCYREGTINESQRLNDVDYLMAPPQCRCE FT SGWHGRDCGQPEIIWRALMTSNRASKRGGSTPLQLVEASSSSLHRLFYMLELGAWDHLS FT LELLELQIRALIEVVDYFLIYYVSNGSKERSLESMLGSQTSYTLLRCSSESNCTSSMAY FT SHFRRQLWQQCGVQMQAQDLLLHGDSGTVYAPAALKFLKYYAKDVLPLKFRLKYNVYGF FT YWQHPKKTLLNGVISSLGHLHSAQLDAHRLHRLASSTLGDLNHYGGWNCELCLPPEQIV FT LLLQSSSPRKLPVKLPNDTRNAHIDANYMQQLIANGVHIDGTTQLHRLREQSEKYFAPE FT EALQHSSQYGQLLVNLYDVDVLEDLQDED" XX SQ Sequence 2189 BP; 608 A; 538 C; 556 G; 487 T; 0 other; ttgaggggtg ccgtaaaatt tttgggcgtg tttgccagca gaagaaaagc gtgaaaagta 60 cgaaaaatcg aaacggaatg agcaggatga actgcagaaa gtgaaccagt gaccatggtg 120 agaagcacat tcctggccac ctacaaccag acaccggtag ccggcgttgg acggctggcc 180 atcaccaaga agctggtgct ctggttggtg ctggtgctgc aggtgggctt catcggctgc 240 atatggctgc tgcagatgag ccgtggccag gagtcgcagc agcgcagtgc aatggaccaa 300 cttggcggac gggtcaactt cgtggccagc ggtgaagccc ctatggagaa gatggcactt 360 gtgggcggaa cccactgtcc gcatctgcag gagaatgtca accgctacga caaggacttt 420 tatcaaatga aaccggaacg actgaacgaa tcccacctgc ccgactacaa tgtgcccgcc 480 tatgtggacg cggagatggg tctaacccca aacctctggt gctatcgcga ggggaccatc 540 aacgagagcc agcggctcaa cgatgtggac tatctgatgg cgccgcctca atgcagatgt 600 gaaagtggct ggcacggcag agattgcggc cagccggaga tcatatggcg agccctgatg 660 acgtccaatc gggccagtaa acgaggcggt agcacaccgc ttcaactggt cgaggccagt 720 tcttcttcac tgcaccgcct gttctatatg cttgaattgg gcgcctggga ccacctaagt 780 ctggagctct tggagctgca aattcgagcg ctcatcgagg ttgtggacta ctttctcata 840 tactatgtga gcaacggcag caaggagcgg agtctggaga gcatgctggg cagccaaacg 900 agctatacgc tactacgctg ctcctccgag agcaactgca ccagctcaat ggcctacagt 960 cactttaggc ggcagctgtg gcagcagtgt ggtgtccaaa tgcaggcaca ggacctgctg 1020 ctgcacgggg acagtggaac ggtctacgcg ccagcagcac tcaagtttct gaagtactat 1080 gccaaggatg tgctgccgct gaaatttcgt ttgaagtaca atgtatatgg attctactgg 1140 cagcatccga agaagaccct cctaaatggg gtgataagtt ccttggggca cctgcacagt 1200 gcccaactgg atgctcaccg cctgcaccgg ctggcgagca gcacactggg tgatctcaac 1260 cactacggcg gctggaactg cgagctgtgc ctgcctcccg agcagattgt gctcctgctg 1320 cagagctcca gtccccgcaa gctgccagta aaactaccca acgatacccg caatgcccac 1380 atcgatgcca actacatgca gcaactgata gccaatggag ttcacatcga tggcaccacg 1440 cagctgcacc gcttgcggga gcagagcgag aagtatttcg ctccggagga ggcgctccag 1500 cacagcagcc agtacggcca gctgctggtg aacctatacg atgtggacgt cctggaagat 1560 ctgcaggacg aagactaact acgcctgccg aagtttgact tgggcatggc agcctatcga 1620 accagcataa acctacgaat atatatattt atatgtgcct gcttttgaat ccccatcaaa 1680 gtctaacaat ctcataatca tcatatcata ctctgcctaa tccactcatg cgaatgccct 1740 tctgtgtttt tggccaggtg aattccaaat ttagtatctc agcagacagg acagacagac 1800 ccgccatctg tgataagaaa aaccagaact aaacaatgaa tttatgagag gaagtcgatg 1860 caaccaactg agagaagtct caaatttgct ggaaaaagtt gtgaaatggg ttgatcgcaa 1920 tttagcatta tttttaagac ataacacaca cgatctgtat gaaaaagctt tttagactta 1980 ctttaaatat taataccaat tatcagaagg caagcaaatt taagcttagt tttggttaca 2040 attttgaagc aattttgaat ttgtgttatt actttattac taacgtaccc taattataat 2100 tagacgaaaa tttgttgacc ttccagatca attcagtatt tataaaaata aaaatcaatt 2160 ggattactca aaaaaaaaaa aaaaaaaaa 2189 // |
|