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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY060718; SV 1; linear; mRNA; STD; INV; 1785 BP.
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AC   AY060718;
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DT   14-NOV-2001 (Rel. 69, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Drosophila melanogaster GH16191 full length cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1785
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M.,
RA   Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J., Pacleb J.,
RA   Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E.,
RA   Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (30-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1785
FT                   /organism="Drosophila melanogaster"
FT                   /map="95B3-95B3"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             18..1703
FT                   /codon_start=1
FT                   /gene="CG10299"
FT                   /product="GH16191p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0051148"
FT                   /db_xref="GOA:Q9VCJ4"
FT                   /db_xref="HSSP:1OGS"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q9VCJ4"
FT                   /protein_id="AAL28266.1"
FT                   /translation="MGKMFASRGMLVLGVLLVSAIGGQSESIPCKLIDAEHGKVCVCTA
FT                   DYCDYLENPVLTDENEWFLISSSKQGLRFSTTSDKFGKEEKFTVQDYVEPTQETANATI
FT                   LSRLLDKVVDSAFTLESRESSITRTVTLRLDRSKTHQKMVGFGGSYTGAVEYLVENFKH
FT                   SELADHLYKSFYAEDGLGFNLMRVSIGGCDFDLEPWSYAEEEGDTELSDMDELNAHDVT
FT                   RVAQIKRLIEVSGVKNLLVKGAAWSSPPWMKTNNRWTGFGRLKRAYYQTWADYHLRWLR
FT                   LMKDNGIPIWAISTGNEPLNGIIFMYFVKFMSLGWTPQTQAIWLNDYLGPTIRNSEFKD
FT                   ITLFGNDDQRYSFPHWFKMMNRTRPNSIDYLDGLSLHWYWDEIFGNSFIEQTKEYAPDK
FT                   ILIVSESCIGDKPWQAAAPLLGSWERAEKYARDYLLNIKLGFHGWIDWNICLDEIGGPN
FT                   YVDNTVDAPVIVNTTTFEEFYKQPMFYAIGHFSKWVPEGSVRIDAVPSNVNLDSVAFLR
FT                   PDNKITAVLFNSGRADLDITLVDSIRGQFVVNVPAKSIHTLLYS"
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SQ   Sequence 1785 BP; 475 A; 408 C; 459 G; 443 T; 0 other;
     ttcgaagtga acggtcaatg ggaaaaatgt tcgccagcag aggaatgctg gtgcttggag        60
     tgcttctggt atcagcaatt ggtggccaat cggaatcgat cccctgcaaa ctcatcgatg       120
     cagaacatgg caaagtgtgc gtctgcacgg cggactattg tgattatctg gagaatcccg       180
     tcctgacgga cgaaaatgag tggttcctta tctccagttc caaacaggga cttcggttct       240
     ccacaactag tgacaaattc ggtaaggagg agaagtttac cgtgcaggat tatgtggaac       300
     ccacgcagga gactgcgaat gcgacaatcc tgtctcgttt gctcgataag gtggtggaca       360
     gtgcttttac cttggagtcc cgggagagtt ccataactcg cactgtaacc ctgcgactgg       420
     acagaagtaa gacccaccag aagatggttg gtttcggtgg cagctacacc ggagcagtgg       480
     aatacctggt agagaacttc aagcattcgg aactggctga ccatctgtac aagtcctttt       540
     acgccgagga tggactgggc ttcaatctca tgcgagtttc cattggcggc tgtgactttg       600
     acttggaacc ctggtcctat gccgaagagg agggcgacac cgagctatcc gatatggatg       660
     aactaaacgc gcatgatgtg acgcgagttg cacagatcaa gcgtctcatt gaggtgtccg       720
     gagtgaagaa tctgttggtc aaaggagctg cctggagttc cccgccctgg atgaagacaa       780
     acaacaggtg gacaggattt ggacgcctca agagggctta ctaccagact tgggccgatt       840
     accatctgcg ttggctaaga cttatgaagg acaatggcat tcccatttgg gccatttcca       900
     cgggcaacga accattgaat ggcatcattt tcatgtattt cgttaagttc atgagcttgg       960
     gatggacgcc acagactcag gccatttggc tgaacgatta tctgggtccc acgatccgta      1020
     actctgagtt caaggacatc accctgtttg gcaacgatga ccaacgctat tcctttcccc      1080
     attggtttaa aatgatgaac cgcactcgac caaactcgat tgattacctc gatgggctat      1140
     cgctgcactg gtattgggat gaaatatttg gcaacagctt tatcgaacag accaaggaat      1200
     atgcccccga caagattttg atagtttccg agtcctgcat aggggacaag ccctggcagg      1260
     cagctgctcc tctgctggga agctgggagc gggccgagaa gtatgccaga gattacttgc      1320
     ttaacattaa gctgggcttc catggctgga ttgactggaa catttgtctg gacgagattg      1380
     gcggtcctaa ctacgtggac aacacggtgg atgccccagt gattgtgaat acaacaacat      1440
     tcgaggagtt ttacaagcag cccatgttct atgccattgg tcacttctcc aagtgggttc      1500
     cagagggatc cgttcgcata gatgcagtac ctagtaatgt taatctggat tccgttgcat      1560
     tcctgcgacc ggacaacaaa atcaccgccg ttctcttcaa tagtggtcgc gccgatctgg      1620
     acatcacttt ggtggatagt attcggggtc agttcgttgt caatgttccg gccaaatcca      1680
     ttcacactct gctgtacagt tgaaaactta ttttttctaa acaaaacaaa aaattaaata      1740
     aagacatgtt caacttggtg aaaaaaaaaa aaaaaaaaaa aaaaa                      1785
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