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EBI DbfetchID AY058775; SV 1; linear; mRNA; STD; INV; 3211 BP. XX AC AY058775; XX DT 21-OCT-2001 (Rel. 69, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Drosophila melanogaster SD05769 full length cDNA. XX KW FLI_CDNA. XX OS Drosophila melanogaster (fruit fly) OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; OC Drosophilidae; Drosophila; Sophophora. XX RN [1] RP 1-3211 RA Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., RA Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., RA Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J., Pacleb J., RA Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., RA Rubin G.M., Celniker S.; RT ; RL Submitted (08-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, RL One Cyclotron Road, Berkeley, CA 94720, USA XX CC Sequence submitted by: CC Berkeley Drosophila Genome Project CC Lawrence Berkeley National Laboratory CC Berkeley, CA 94720 CC This clone was sequenced as part of a high-throughput process to CC sequence clones from Drosophila Gene Collection 1 (Rubin et al., CC Science 2000). The sequence has been subjected to integrity checks CC for sequence accuracy, presence of a polyA tail and contiguity CC within 100 kb in the genome. Thus we believe the sequence to CC reflect accurately this particular cDNA clone. However, there are CC artifacts associated with the generation of cDNA clones that may CC have not been detected in our initial analyses such as internal CC priming, priming from contaminating genomic DNA, retained introns CC due to reverse transcription of unspliced precursor RNAs, and CC reverse transcriptase errors that result in single base changes. CC For further information about this sequence, including its location CC and relationship to other sequences, please visit our Web site CC (http://fruitfly.berkeley.edu) or send email to CC cdna@fruitfly.berkeley.edu. XX FH Key Location/Qualifiers FH FT source 1..3211 FT /organism="Drosophila melanogaster" FT /map="98F14-98F14" FT /mol_type="mRNA" FT /db_xref="taxon:7227" FT CDS 308..2365 FT /codon_start=1 FT /gene="CG11874" FT /product="SD05769p" FT /note="Longest ORF" FT /db_xref="FLYBASE:FBgn0039634" FT /db_xref="GOA:Q9VAP8" FT /db_xref="HSSP:1FO3" FT /db_xref="InterPro:IPR018247" FT /db_xref="UniProtKB/TrEMBL:Q9VAP8" FT /protein_id="AAL14004.1" FT /translation="MKDGGHITLTLPPGSAATTDERGRKSLRRAWNQLPRCQRNLIILG FT ITGFCVTVLLCLSGDQLLAASLKDVDTKAEVAAYQMPLPNPHHHPGVDKDVPKDTAAVP FT VPADKRAPRVEAVSDKFNELVAYGEANSAENVARLPETVAAEGLPQASAMAVALPPPDS FT NKEQDIGGIDILNNVEEPVAQDPAEPLSEGEQLEQAIKNPLTLGGVSFKEHLKKIKPIL FT AKGQHFHGATNERQSAVVAAFKHSWAGYKKYAWGHDNLKPISQYSHEWFGLGLTIVDSL FT DTMYIMGLDDEFKEGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLSGDTMFLAK FT AAELGNRLLPAFQSPSNIPYSDVNLGDLSAHSPKWSPDSSTSEVTTIQLEFRDLSRSTN FT ISIYEQVAHKVNEKVHDLEKNHGLVPIFINANTGTFRNYATISLGARGDSYYEYLLKQW FT IQTGRKDNDNLILDYMQAVDGVLTQLMRRTPREHWVYIGELINGKDFKPKMDHLTCYLP FT GTLILGHQNGMPDSHLILARDLLDTCYQTYMMNPTHLAAEISYFALTEKDDQDIYVKPN FT DAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQAFETHAKVNAGYTSMGNVKNTQST FT RLRDLMESFWMSETLKYFYLLFSDDRKEIDLEQWVFNSEGHPLPVYPLKT" XX SQ Sequence 3211 BP; 891 A; 755 C; 783 G; 782 T; 0 other; ttgaagaaca agttggcagc attgcagctc aaaaatgcag ctctcgtgaa ataattttag 60 aatttcttat ttgtaatttt gcgtagtgtg ggccagaact agcatatata aattaatgca 120 ctggcacgta tagagatgat taaggcataa aagaggtagt agttggacca accttggtta 180 gttagctccg attcctccgc ggccagcggc gcacagcaat cgatttttat tcgaggcgaa 240 tgctgtggaa tttcccatcc aactttccca cactctgaat tccggcggcg gcatttagtg 300 aaacactatg aaggacggcg gtcacataac gctcacactc ccgccgggat cagcggcgac 360 gacggacgag cggggcagga agagcctgcg tcgggcttgg aatcagctac cgcgttgtca 420 gcgcaatctc attattctgg gcatcaccgg attctgcgtg acagtgttgc tctgcctaag 480 tggcgatcag ctgctggctg ccagcttaaa ggatgtggac accaaggccg aggtggcagc 540 atatcaaatg cccctgccca atccgcacca tcatccgggg gtggataagg atgtgcccaa 600 agacactgct gcggtacctg ttccggccga taagagagca ccccgggtgg aggcggttag 660 tgataagttt aatgagctag ttgcctatgg agaagcgaac tcagcggaga acgtggcccg 720 tctgccggag acggtggctg ctgaaggact tccccaggcc tcggccatgg ccgtggcctt 780 gcctcccccc gatagtaaca aggagcagga catcggtgga atcgacatcc taaacaatgt 840 agaggagccc gtcgcccagg atccagcaga gccgctaagc gagggcgagc agcttgagca 900 agccatcaag aacccactca ctctgggcgg cgttagcttc aaagagcatc tcaaaaagat 960 caagcccatt ttggccaagg gccagcactt ccatggcgcc accaacgaaa gacagtcggc 1020 tgtggtagcc gcctttaagc actcctgggc tggctacaag aagtatgcct ggggccacga 1080 caacctgaag cccatctccc agtactccca cgagtggttc ggtctgggac taaccattgt 1140 tgactcattg gataccatgt acataatggg actggatgat gaattcaagg aaggacgcga 1200 ctgggtagag caatcactgc gctttgatac caagcgcgat gtaaacctat tcgaggtcac 1260 catacgtgtc ctaggcggac tgctgtctgc atatcacctg agcggcgata caatgtttct 1320 ggccaaggct gcggagctgg gcaaccgttt acttcccgcc tttcaatcgc cgtcaaatat 1380 cccctattct gatgtgaatc tcggagatct ttcggcgcac tcgccgaagt ggtctcctga 1440 tagctccacc agtgaggtca ccaccattca gctagagttt cgtgatttga gtcgctctac 1500 aaacatctcc atttatgaac aggttgctca caaagtaaac gagaaggtgc atgatctgga 1560 gaagaaccat ggtttggtgc ccatattcat taacgccaac acaggaacat tccgaaacta 1620 cgccactatc tcgcttggtg ctcgtgggga ctcctactat gagtacttgc tcaaacagtg 1680 gattcagacc ggccgcaagg ataatgataa ccttattttg gactacatgc aagcagtcga 1740 tggtgttcta acacaactga tgcggcgtac gccacgcgag cactgggttt acattggcga 1800 gctgatcaat ggcaaagact ttaagccgaa aatggatcac cttacgtgtt atctgccggg 1860 cactttgatt ctgggtcacc agaacggaat gccagactcg caccttatac ttgcgaggga 1920 tttattggat acatgctatc agacctatat gatgaatccc acacatttgg ctgctgagat 1980 ctcgtatttc gcgctaaccg aaaaggacga tcaggacatt tatgtgaagc caaacgatgc 2040 ccacaacctg ttgcgcccgg agtttgtgga gagtctctat tacttctact caataactgg 2100 caatcggaca taccaggaca tgggatggaa aattttccag gcgtttgaga ctcacgctaa 2160 agtaaatgca ggctacacat cgatgggaaa tgtaaagaac acacagagca cgcgtctgcg 2220 cgatctgatg gaaagctttt ggatgagcga gaccctgaag tacttctacc tgctgtttag 2280 cgacgaccgc aaggaaatcg acctggagca atgggtcttc aattcggagg gccatccact 2340 gccggtctat ccgctcaaga cttaactacc gcctaagtga agcaactaga gggcagagca 2400 acttagttgc gtccgcgaca ctaactgaaa gccgaatgga gttggtgcat tcatgccgca 2460 actatcgttt aactcgtatt cgcaatttag cgtaaatgcc aaatactatg ctaagcttag 2520 agatacgcag agcagagttg gcttatcgga tgaagcaatg cccaacatcg ggatggatcg 2580 attgagacag aaattgtagc ccctggggca acaaattagg gtgcaatatc acttgtttaa 2640 cgccagacct ctactaacaa aattcagtta aaatatttac taagtctatc tatagaaggc 2700 cagcaatctt aatccattat ctgtggaagg tgttagattt gaggttgcac caagaaaaag 2760 ctgcatttgt cgccccaggg atttttgcga aatcatccca tcttcctatt aaacatgtca 2820 tttgaaaatc gttagcaatc gattgtataa tattctgtgt actgataatt gttattttgt 2880 aattatttat ttcctattat aagcacgaac tgtaacacga tattggggca ttgcaaaccc 2940 attttttaga cagtagcatc aatcgaatcc gccagcaggt tttaaccttg taatctatgg 3000 tagttaaacg tgtatgttta tgttagcatg atattaggaa tcagttgcac tactcagcac 3060 aaagtcgatt tgtgtgtaat cttaaaggta gcgaataaat gaatctcaat gaaaatgagc 3120 agaacatttt cgatcccacg gcaacctgtg aatgtatgta aaacggagcc aataataaaa 3180 tgcaagtgtt tttaaaaaaa aaaaaaaaaa a 3211 // |
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