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EBI DbfetchID AY057715; SV 1; linear; mRNA; STD; PLN; 1667 BP. XX AC AY057715; XX DT 26-OCT-2001 (Rel. 69, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Arabidopsis thaliana AT4g24430/T22A6_260 mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1667 RA Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., RA Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., RA Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., RA Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., RA Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., RA Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Arabidopsis cDNA clones"; RL Unpublished. XX RN [2] RP 1-1667 RA Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., RA Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., RA Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., RA Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., RA Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., RA Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT ; RL Submitted (25-SEP-2001) to the EMBL/GenBank/DDBJ databases. RL Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology RL Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey RL Pines Road, La Jolla, CA 92037, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Cheuk,R., Chen,H., CC Kim,C.J., Koesema,E., Meyers,M.C., Shinn,P., Banh,J. Bowser,L., CC Dale,J.M., Goldsmith,A.D., Jiang,P.X., Jones,T., Karlin-Neumann,G., CC Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Nguyen,M., CC Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Southwick,A., CC Tang,C.C., Toriumi,M., Yamada,K., Yamamura, Y., Yu,G., Yu,S., CC Davis,R.W., Theologis,A., and Ecker,J.R. CC Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk) CC contributed equally to this work as PIs. XX FH Key Location/Qualifiers FH FT source 1..1667 FT /organism="Arabidopsis thaliana" FT /chromosome="4" FT /mol_type="mRNA" FT /clone="RAFL09-67-P06(R14801)" FT /note="ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..103 FT CDS 104..1567 FT /codon_start=1 FT /product="AT4g24430/T22A6_260" FT /note="LG27/30-like gene" FT /db_xref="GOA:Q93Z90" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR010325" FT /db_xref="InterPro:IPR013784" FT /db_xref="UniProtKB/TrEMBL:Q93Z90" FT /protein_id="AAL15345.1" FT /translation="MAIADNRQRKMPLPEDRLGKRGRPLAYPEAVLLVHPVEDEFKGEV FT DDKYEYSIENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLSKQNLTSHVGPISLAMFL FT SAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTSDPLSLWQDAKNQMLTEVQSWP FT YDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGAFVGLAPPGEVGSWQLESKGY FT QFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQLINITAGCDIDVGNIVYEPP FT RDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYPKEDLV FT FTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIALATANVAE FT LQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNVDVPSEKLVEGDNTLFLT FT QTMTTTGAFNGLMYDYIRLEGPPLDSYSH" FT misc_difference 261 FT /replace="g" FT /note="compared to genome" FT 3'UTR 1568..1667 XX SQ Sequence 1667 BP; 503 A; 315 C; 389 G; 460 T; 0 other; attctactca tatgcgatat ttgagcatct agcggaatgg ccagctttta acttgcctca 60 gacaaggatt gtctacaagc ttcgtaaaga caagtttaaa tatatggcga ttgctgataa 120 caggcagagg aaaatgccac ttccagagga tagattgggg aaaagaggaa gacctttggc 180 ttatcctgaa gctgttcttc ttgttcatcc tgttgaagac gagtttaaag gagaggttga 240 tgacaagtat gagtattcaa ttgagaacaa agatctgaaa gtgcatggat ggatctcaca 300 taacttggat ttgggttgct ggcaaatcat tcctagcaat gagttcagat caggtggctt 360 gtccaaacag aaccttactt ctcatgttgg tcccatcagt cttgctatgt ttttgagtgc 420 tcactacgcg ggtgaggata tggtgatgaa ggtgaaagca ggggactcat ggaagaaagt 480 gtttggtcct gtctttactt acctcaattg cttgcctgac aaaacctctg accctctttc 540 gctatggcaa gacgctaaaa accagatgtt aactgaagtc caaagctggc cttacgattt 600 ccctgcttca gaagactttc cagtgtccga taagcgcggt tgcatcagcg gtagattact 660 agtatgcgac aaatttctta gtgatgattt tttaccagca aatggtgctt tcgtagggtt 720 ggctccacca ggagaggttg gatcctggca attagaatct aagggatatc aattctggac 780 agaagcagat tctgatggtt atttcgcgat aaatgatatc cgagaaggcg agtataatct 840 caatggttat gtgacaggat ggataggaga ctatcaatac gaacaattga ttaacattac 900 tgcaggctgc gacattgacg ttggcaatat cgtgtatgaa ccgccccgag atgggccaac 960 agtgtgggaa atagggatac ctgaccggtc tgcagctgag ttctttgttc cagacccaaa 1020 tcccaaatac atcaacaaac tatatattgg tcatcctgat aggtttaggc aatacgggct 1080 atgggaaaga tacacagaac tatatcctaa ggaagatttg gtgttcacca ttggcgtcag 1140 tgattacaaa aaagattggt tctttgcaca cgttaccagg aaaatgggag atgatacata 1200 tcagaaaaca acatggcaaa tcaagttcaa gctagagaat gtacagaaaa gttgcacata 1260 caaaatccgg atcgcgctag caactgcaaa tgtagcagaa ttacaggtga ggatgaatga 1320 tgatgacaca gaaaagacta ctcctatatt cacaacgggt gtaatcgggc acgataacgc 1380 gattgcaaga catgggatac atggaatcta taggctttat aatgtggatg taccaagtga 1440 gaagcttgtg gaaggagaca acactttgtt cttgacacaa accatgacca ccactggagc 1500 ctttaatggt ctcatgtatg actatatccg cctcgaagga cctcctttag attcatactc 1560 tcactaggac ttttagtcac attattgtat acgcaatttt gtattgcggg ttactttact 1620 aataaaaaaa aagacattat atgggccttg tgttgggcct tctttct 1667 // |
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