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EBI DbfetchID AY056198; SV 1; linear; mRNA; STD; PLN; 1508 BP. XX AC AY056198; XX DT 02-OCT-2001 (Rel. 69, Created) DT 20-SEP-2002 (Rel. 73, Last updated, Version 3) XX DE Arabidopsis thaliana putative pectin acetylesterase (At5g45280) mRNA, DE complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1508 RA Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., RA Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., RA Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., RA Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., RA Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-1508 RA Yamada K., Banh J., Banno F., Dale J.M., Goldsmith A.D., Lee J.M., RA Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Yamamura Y., Yu G., Yu S., RA Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Koesema E., RA Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tracy S.E., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (12-SEP-2001) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Banh,J., CC Banno,F., Dale,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., CC Quach,H.L., Tang,C.C., Toriumi,M., Yamamura,Y., Yu,G., Yu,S., CC Bowser,L., Chen,H., Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., CC Koesema,E., Lam,B., Lin,J., Meyers,M.C., Miranda,M., Nguyen,M., CC Palm,C.J., Shinn,P., Southwick,A., Tracy,S.E., Davis,R.W., CC Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation is based on the January 2002 version of the Arabidopsis CC genome submitted to GenBank. XX FH Key Location/Qualifiers FH FT source 1..1508 FT /organism="Arabidopsis thaliana" FT /chromosome="5" FT /mol_type="mRNA" FT /clone="RAFL07-07-E07 (R10636)" FT /note="This clone is in a modified pBluescript vector FT (FLC-1) as a BamHI/XhoI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..113 FT /gene="At5g45280" FT CDS 114..1226 FT /codon_start=1 FT /gene="At5g45280" FT /product="putative pectin acetylesterase" FT /db_xref="GOA:Q93ZX9" FT /db_xref="InterPro:IPR004963" FT /db_xref="UniProtKB/TrEMBL:Q93ZX9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAL07047.1" FT /translation="MTWLKQMWSSILVLAVVVIGARAVPITYLESAVAKGAVCLDGSAP FT AYHFDKGSGSGVNNWIVHMEGGGWCTDIATCVQRKSTMKGSSKLMNKDFGFSGILGGKQ FT STNPDFYNWNRIKVRYCDGSSFTGDIEAVDPTHKLFFRGARVWRAVIDDLMAKGMSNAQ FT NAILSGCSAGALAAILHCDQFKSTLPKTAKVKCVSDAGYFIHGKDITGGSYIQSYYAKV FT VATHGSAKSLPASCTSSMKPDLCFFPQYVAKTLQTPLFVINAAFDSWQIKNVLAPTSVD FT KSKAWKTCKLDLKKCTAAQLQTVQETKCWLRWRLFDPRRRTDCSWTRAMLIAKVEALPL FT GPATKVPQSRIRKWLRRLEIGSLRGVRFRT" FT 3'UTR 1227..1508 FT /gene="At5g45280" FT misc_feature 1492 FT /gene="At5g45280" FT /note="artifact within poly A tail" XX SQ Sequence 1508 BP; 423 A; 311 C; 329 G; 445 T; 0 other; gaacttgtaa accttactct cgaagagtcc tctgttactc atttttacat tgtaaaaaaa 60 aacttctttt cttctctacg tgaataagaa tctgaagagt cattttctca agaatgacgt 120 ggctaaaaca aatgtggtca agcattttag tgctagccgt ggtggtgatc ggagccagag 180 ctgtgcccat cacgtatctt gaatctgcag tggctaaagg agctgtgtgt ttggatggta 240 gcgcgccagc ataccatttc gataagggat cgggctcagg agtgaacaat tggatcgttc 300 atatggaagg aggaggatgg tgcactgata tagctacatg cgttcaacgt aaaagtacaa 360 tgaagggttc ttctaagctt atgaacaaag actttggttt ctccggtatc ttgggtggca 420 agcaaagcac caatccagac ttttacaatt ggaatagaat caaagttcgg tattgcgatg 480 gttcatcttt caccggtgat atagaagctg ttgatccgac gcacaagctg ttctttcgcg 540 gtgctagggt ttggcgtgcg gtgatcgatg atcttatggc taagggaatg agcaacgctc 600 aaaacgctat actctccggt tgttcagctg gagcattggc tgcgattcta cattgcgacc 660 agttcaagtc cactctccct aaaacggcta aggtcaaatg tgtttctgac gctggttact 720 tcatccacgg taaggatatc actggaggat cttacatcca atcctactac gccaaagtcg 780 tagcgaccca cggatctgca aagagtctac ctgcttcttg cacctcaagt atgaagcctg 840 atttgtgttt cttccctcaa tacgttgcta agaccttaca aacaccgctt ttcgtcatca 900 atgccgcctt cgattcttgg cagatcaaga atgtattggc accaacctct gttgataaaa 960 gcaaagcatg gaagacttgt aagcttgatc ttaagaagtg tacggccgct cagcttcaaa 1020 ccgttcaaga gaccaagtgt tggctgcgtt ggcgcctgtt cgatccgcga cgacgaacgg 1080 attgttcttg gactcgtgcc atgctcattg ccaaggtgga agcgctgcca cttggtccgg 1140 cgacaaaggt cccacagtcg cgaatacgaa aatggctaag gcggttggag attggttctt 1200 tgagaggagt acgtttcaga acgtagattg ttcatcgctt aattgcaacc ctacttgccc 1260 tgcagtatct actgaagact aaaatttatt cattgatgtc ttaaaattta ttcatctttg 1320 gaatattgtt cttgaaattt aaaagtaaaa taatataatt gatacaattt cattcgaata 1380 aataaaatcc tttgcccttc tacaatcgtt taagctgtta tatataatca atctctctta 1440 ttattgggtt cgcaatttct taaattcttt ttaataaaga atcaatctta agaaaaaaaa 1500 aaaaaaaa 1508 // |
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