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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY054544; SV 1; linear; mRNA; STD; PLN; 1621 BP.
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AC   AY054544;
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DT   06-SEP-2001 (Rel. 69, Created)
DT   06-SEP-2001 (Rel. 69, Last updated, Version 1)
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DE   Arabidopsis thaliana Unknown protein (At1g34270; F23M19.7) mRNA, complete
DE   cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1621
RA   Southwick A., Karlin-Neumann G., Nguyen M., Lam B., Miranda M., Palm C.J.,
RA   Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K.,
RA   Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X.,
RA   Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (28-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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CC   e-mail for correspondence:  arab@sequence.stanford.edu
CC   RIKEN Genomic Sciences Center (GSC) members  carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : ''RIKEN
CC   Arabidopsis  Full-Length cDNA''): Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M.,  Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
CC   Hayashizaki,Y. and  Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out  the
CC   sequencing and annotation of the RAFL cDNAs: Nguyen,M.,
CC   Southwick,A.,  Karlin-Neumann,G.,  Lam,B., Miranda,M., Palm,C.J.,
CC   Bowser,L., Jones,T.,  Banh,J., Chen,H., Cheuk,R., Chung,M.K.,
CC   Kim,C., Lin,J., Liu,S.X., Pham,P.K.,  Sakano,H., Shinn,P.,
CC   Yamada,K., Ecker,J., Theologis,A. and  Davis,R.W.
CC   Southwick,A., (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed
CC   equally to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford)  contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1621
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="I"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL11-01-E22"
FT                   /note="This clone is in pBluescript"
FT                   /db_xref="taxon:3702"
FT   CDS             31..1464
FT                   /codon_start=1
FT                   /gene="At1g34270; F23M19.7"
FT                   /product="Unknown protein"
FT                   /db_xref="GOA:Q9XID1"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XID1"
FT                   /protein_id="AAK96735.1"
FT                   /translation="MVPKIASMASTRPLCSIPSIFLSFSLLFVVSLLFFFSNSLISNPN
FT                   PSISHNTLQNGINVYVAELPRSLNYGLIDKYWSSSTPDSRIPSDPDHPTRKTHSPDKYP
FT                   PYPENPLIKQYSAEYWIMGDLETSPEKRIGSFAKRVFSESDADVVFVPFFATLSAEMEL
FT                   GNGKGSFRKKSGNEDYQRQRQVLDFVKNTKAWKRSNGRDHVFVLTDPVAMWHVREEIAL
FT                   SILLVVDFGGWFRQDSKSSNGTSLPERIQHTQVSVIKDVIVPYTHLLPRLDLSQNQRRH
FT                   SLLYFKGAKHRHRGGLIREKLWDLLVNEPGVVMEEGFPNATGREQSIRGMRNSEFCLHP
FT                   AGDTPTSCRLFDAIQSLCIPVIVSDTIELPFEGIIDYSEFSVFASVSDALTPKWLANHL
FT                   GRFSEREKETLRSRIAKVQSVFVYDNGHADGIGPIEPNGAVNHIWKKVQQKVPMVKEAV
FT                   IRERRKPAGASVPLRCQCI"
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SQ   Sequence 1621 BP; 447 A; 338 C; 355 G; 481 T; 0 other;
     agagatcttt cctgcgaagc aaaatcgaag atggttccta agatcgcatc aatggcgtct        60
     actagacctc tctgttcaat tccttctatc ttcctctctt tctctctcct cttcgtcgtc       120
     tctcttctct tcttcttctc caattcctta atctccaatc caaatccgag catttcacac       180
     aacactctcc aaaacggtat caatgtctat gtagctgagc ttccaagatc cctaaactat       240
     ggtcttatcg acaaatactg gtcctcttct actccagatt cacgtatacc cagtgaccca       300
     gatcacccga cccgtaaaac ccattcaccc gataaatacc caccgtaccc agagaacccg       360
     ttgatcaagc aatacagtgc tgagtactgg atcatgggag acctagaaac ctcaccagag       420
     aaacgaattg gatcttttgc taaaagggtt tttagtgaat ctgacgctga tgtagtcttc       480
     gtgcctttct ttgcgacgtt aagtgcagag atggagcttg gaaatggtaa aggttcgttt       540
     agaaagaagt ctggtaacga agattatcaa agacagagac aagtgcttga ttttgtcaag       600
     aacactaaag cttggaaacg atctaatggt cgtgatcacg tttttgttct aacggaccct       660
     gttgcaatgt ggcatgttcg tgaggagatt gctttatcta ttcttcttgt ggtggatttt       720
     ggaggatggt ttaggcaaga ttctaagtcg tctaatggga ctagcttgcc tgagaggatt       780
     cagcatactc aagtctctgt cattaaggat gtgattgttc catatacgca tttgcttcct       840
     agactggatt tgtctcagaa ccagagacgt catagccttc tttattttaa aggcgctaag       900
     cacagacatc ggggagggtt aatcagagaa aaactatggg acttgctggt caatgagcct       960
     ggcgttgtca tggaagaagg ttttcctaat gcaacaggaa gggaacagtc gataagagga      1020
     atgagaaact cagagttctg cttacatcca gctggtgaca ctcccacttc atgccgtctc      1080
     tttgatgcca ttcaaagtct atgcatccct gtgattgtca gcgacaccat agagctcccg      1140
     tttgagggaa taatcgatta ctcagaattc tcggtttttg cctctgtaag tgatgcatta      1200
     acacctaaat ggttggctaa tcatctcgga aggttctctg aaagagagaa ggaaacattg      1260
     agaagtagaa tagcaaaggt tcagtcagtt tttgtgtatg ataatggtca tgccgatggg      1320
     attggaccta ttgaacccaa tggtgcggtg aatcacatat ggaagaaggt tcagcagaag      1380
     gtgccaatgg tgaaggaggc agtgattagg gagaggagaa aaccagcagg tgcttccgtt      1440
     ccacttcgat gtcaatgtat ctaaataatg caaccaatcc aaaagataga aagtgttcct      1500
     tttactttgt tggtcttttc ttttgtactt gtttcgttta cgaacattgt tatggccact      1560
     ttaaaatcca tgttccttag ggttcacaga aaatattgaa tcatgtaaga ggtttcatta      1620
     t                                                                      1621
//
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