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EBI DbfetchID AY054482; SV 1; linear; mRNA; STD; PLN; 2327 BP. XX AC AY054482; XX DT 06-SEP-2001 (Rel. 69, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Arabidopsis thaliana endoplasmic reticulum alpha-mannosidase, putative DE (At1g30000; T1P2.10) mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-2327 RA Southwick A., Karlin-Neumann G., Nguyen M., Lam B., Miranda M., Palm C.J., RA Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., RA Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X., RA Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., RA Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.; RT ; RL Submitted (28-AUG-2001) to the EMBL/GenBank/DDBJ databases. RL DNA Sequencing and Technology Center, Stanford University, 855 California RL Avenue, Palo Alto, CA 94304, USA XX CC e-mail for correspondence: arab@sequence.stanford.edu CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : ''RIKEN CC Arabidopsis Full-Length cDNA''): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Nguyen,M., CC Southwick,A., Karlin-Neumann,G., Lam,B., Miranda,M., Palm,C.J., CC Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R., Chung,M.K., CC Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H., Shinn,P., CC Yamada,K., Ecker,J., Theologis,A. and Davis,R.W. CC Southwick,A., (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed CC equally to this work. Shinozaki,K. (RIKEN GSC) and Davis,R.W. CC (SSP/Stanford) contributed equally to this work as PIs. XX FH Key Location/Qualifiers FH FT source 1..2327 FT /organism="Arabidopsis thaliana" FT /chromosome="I" FT /mol_type="mRNA" FT /clone="RAFL07-14-A20" FT /note="This clone is in pBluescript" FT /db_xref="taxon:3702" FT CDS 133..2007 FT /codon_start=1 FT /gene="At1g30000; T1P2.10" FT /product="endoplasmic reticulum alpha-mannosidase, FT putative" FT /db_xref="GOA:Q93Y37" FT /db_xref="HSSP:1FO3" FT /db_xref="InterPro:IPR001382" FT /db_xref="UniProtKB/TrEMBL:Q93Y37" FT /protein_id="AAK96673.1" FT /translation="MSKSLPYSVKDIHYDNAKFRHRSPLKVFSQSLLTLSTKRNYASCS FT TGKFLILILFFGVACLMLMSKSPNESGLNEKGKVTFVGGLRLGGLLRKPPRLPPRLSPD FT EGQLRGSSTNGSTISNSDPKWAARQQSVKEAFDHAWSGYRKYAMGYDELMPISQKGVDG FT LGGLGATVVDALDTAMIMGLDNIVSEAGSWVETHLLERISQKGQVNLFETTIRVLGGLL FT SAYHLSGGEQGTVNMTHVGPKPVIYLNIAKDLADRLLSAFTSSPTPVPFCDVILHESTA FT HPAPGGASSTAEVASVQLEFNYLSSISGDPKYSTEAMKVLAHIKTLPKTEGLVPIYISP FT QTGDFVGENIRLGSRGDSYYEYLIKVWLQQGAKLNSNFTYLHDMYIEAMKGVRHLLVQN FT SIPKGLVFVGELPYGSKGEFSPKMDHLVCFLPGTLALGATKGLTKEQALKENLLSFEDL FT ENLKLAEDLAKTCFEMYEVTATGLAPEIAYFHTKDYTEDGLDGGNKSSMYANDIIIKPA FT DRHNLLRPETVESLFVLYRITKDTKYRDQGWQIFEAFEKYTKVKSGGYTSLDDVTEVPP FT HRRDKMETFFLGETLKYLYLLFGDDSVIPLDKFVFNTEAHPLPIRRNT" XX SQ Sequence 2327 BP; 710 A; 437 C; 508 G; 672 T; 0 other; attcttctga aaaaaaaaaa tctcatctgg tcccgaagaa atctcatctt attctccggt 60 cattattaga tcggcggcag acagaacacg aaccccaaag ccgatcttca attagaacgg 120 ggggatctga gcatgtcgaa atctctacca tattcagtta aagatattca ttacgacaat 180 gccaagttca gacatcgatc tcctttaaag gttttttctc aaagcttgct tactcttagt 240 acaaaacgca actacgctag ctgtagcacg gggaagttcc ttatattaat actgttcttt 300 ggagtagcat gtctaatgct gatgagtaag agtccaaatg aatctggtct taatgagaaa 360 ggaaaggtca cttttgttgg gggacttagg ctagggggac ttttgagaaa gccacctagg 420 cttccacctc gtttatcacc tgacgaagga caattaagag gaagttccac taatggctca 480 actatttcaa attctgaccc aaaatgggca gctaggcagc aaagtgtaaa agaggctttt 540 gaccatgcat ggtctggcta tagaaagtac gccatgggtt atgacgagct aatgcctatt 600 agccagaaag gtgtggatgg tttaggagga ttaggtgcca ctgttgtgga tgctcttgat 660 acagccatga taatgggtct tgataatatc gtctctgaag caggatcatg ggttgagact 720 catctcttgg agagaatcag tcaaaaaggt caagttaatt tgtttgaaac tacaatacgt 780 gtcttaggtg ggcttctaag tgcataccat ttgagtggag gagagcaggg tacggtgaac 840 atgacccatg ttggaccgaa accagtcatc tatctaaata ttgctaagga tttggctgac 900 cgtctacttt cggcttttac ctccagccct actccagttc ccttttgtga tgtcatattg 960 catgaatcga ctgctcatcc agctccagga ggagcgagca gtacagcaga agttgcctct 1020 gtacagcttg aatttaacta cctcagttct atttctggtg atccaaagta tagtacagag 1080 gccatgaagg tcttagctca tataaaaaca cttccaaaga cagaaggtct tgttccaatc 1140 tatatcagcc ctcaaacagg tgactttgtt ggtgagaata tcaggttggg atctcgtggt 1200 gatagctact atgagtattt aattaaggtg tggcttcagc aaggagctaa gttgaatagt 1260 aatttcacat atttgcatga tatgtacatt gaggcaatga aaggagtcag gcatttgctt 1320 gtgcaaaatt caattccaaa aggtctggtc tttgtagggg agttacctta cgggtctaag 1380 ggagaattca gtccaaaaat ggatcatttg gtatgcttct tgcctggtac tcttgctctc 1440 ggtgctacca agggcctcac aaaggaacaa gccctgaagg aaaatctttt gtcctttgag 1500 gacctagaaa atctgaaact tgcagaagat ttagcgaaaa catgctttga gatgtatgaa 1560 gtaactgcca ctggccttgc tccagaaatt gcttactttc acacaaagga ttacactgag 1620 gatggtcttg atggtgggaa taagagttct atgtatgcaa atgacataat cattaagccc 1680 gctgatcgac ataatctact gcgccctgaa actgttgaat cactctttgt cctctatcgt 1740 atcacaaaag atacaaaata ccgagatcaa ggttggcaaa tttttgaagc ttttgaaaag 1800 tacacaaagg tgaaatcagg tggatacaca tcattggatg atgtaacaga agtgcctcct 1860 catagaagag ataagatgga gacatttttc cttggtgaaa cattgaagta cttatacttg 1920 ctctttggag atgactcagt gataccattg gataagtttg ttttcaacac tgaagctcat 1980 ccattaccaa taagaagaaa cacctgaagg cttagttttg aagactactc cagacaatac 2040 acacacacac acacatacac aaacttaaga gagggtatgg agaaagtgat gtatagtaca 2100 ctgccaattg gagaagaagt tagttcgttg aggaaaaaaa gtcataactt tcaatgtaag 2160 ataagcttct gcatccaaat tataacttaa ctcgtaaaag tttttgcttg tagtagtagg 2220 tttcttgaga ctaatattct ctcttttcgt taagctctca cttggcaaaa tgtaatcaga 2280 cacaattgac atggagatga attatggttt tagtttttta tacatac 2327 // |
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