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EBI DbfetchID AY054180; SV 1; linear; mRNA; STD; PLN; 1664 BP. XX AC AY054180; XX DT 02-OCT-2001 (Rel. 69, Created) DT 02-OCT-2001 (Rel. 69, Last updated, Version 1) XX DE Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1664 RA Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., RA Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., RA Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., RA Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., RA Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., RA Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT "Arabidopsis cDNA clones"; RL Unpublished. XX RN [2] RP 1-1664 RA Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., RA Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., RA Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., RA Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., RA Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., RA Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., RA Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.; RT ; RL Submitted (22-AUG-2001) to the EMBL/GenBank/DDBJ databases. RL Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology RL Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey RL Pines Road, La Jolla, CA 92037, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Cheuk,R., Chen,H., CC Kim,C.J., Koesema,E., Meyers,M.C., Shinn,P., Banh,J. Bowser,L., CC Dale,J.M., Goldsmith,A.D., Jiang,P.X., Jones,T., Karlin-Neumann,G., CC Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Nguyen,M., CC Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Southwick,A., CC Tang,C.C., Toriumi,M., Yamada,K., Yamamura, Y., Yu,G., Yu,S., CC Davis,R.W., Theologis,A., and Ecker,J.R. CC Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk) CC contributed equally to this work as PIs. XX FH Key Location/Qualifiers FH FT source 1..1664 FT /organism="Arabidopsis thaliana" FT /chromosome="5" FT /mol_type="mRNA" FT /clone="RAFL09-22-J23(R13957)" FT /note="ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..231 FT CDS 232..1479 FT /codon_start=1 FT /product="AT5g61840/mac9_140" FT /note="unknown protein" FT /db_xref="GOA:Q940Q8" FT /db_xref="InterPro:IPR004263" FT /db_xref="UniProtKB/TrEMBL:Q940Q8" FT /protein_id="AAL06841.1" FT /translation="MKLSSCVLIFLLCNTFSSISAFRLSRSQPTERISGSAGDVLEDDP FT VGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIYMQRFLLSSPVRTLNPEEADWFYV FT PVYTTCDLTPNGLPLPFKSPRMMRSAIQLIASNWPYWNRTEGADHFFVVPHDFGACFHY FT QEEKAIGRGILPLLQRATLVQTFGQRNHVCLKEGSITVPPYAPPQKMQSHLIPEKTPRS FT IFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFC FT LCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEDIGVFVDEKDVPYLDTIL FT TSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHERSVYLRPGE FT KLLNWTAGPVADLKPW" FT 3'UTR 1480..1664 XX SQ Sequence 1664 BP; 449 A; 332 C; 391 G; 492 T; 0 other; aaatgaaaat cgctgggctc tcgctgtcaa cgctgggcgt gagtgagatc taacaatcgg 60 tagcgaattt tgtaaatttt gttccggttt tgaagtctca atctcggggt tccggtttta 120 gcaactactt cttctgacat ttcagctgtt ctagttgatc tttatatact ttatatgatc 180 tgggattttg aagagttttt agggaggaac caaaatttct gagagagaaa aatgaagtta 240 tcgagctgcg ttttgatctt ccttctatgt aacacattct cctcgatttc tgctttccgt 300 ctgagtcgga gtcaaccaac tgagcgaatt tcaggtagtg ctggtgatgt gttggaagat 360 gatcccgtgg gaagactgaa agtctttgtt tatgagcttc caagtaaata caacaagaag 420 atacttcaga aggatccgag atgtctaaac cacatgtttg ctgctgagat atatatgcaa 480 cggtttcttt tatctagccc agttcgaaca cttaatcccg aggaagctga ttggttctac 540 gtacctgtgt acaccacttg tgatctcacg cctaatgggc ttcctcttcc ttttaaatct 600 ccacgaatga tgagaagtgc cattcagctt attgcttcca attggccata ctggaatcgc 660 acagaaggag cagaccactt ctttgttgtg cctcatgact ttggagcctg tttccattat 720 caagaagaga aggcaatagg aagaggaata ctacccttgc ttcaacgagc tacactggtg 780 cagacatttg gacaaaggaa tcatgtttgc ttgaaagaag gttcaatcac tgttcctcca 840 tatgctccac cacagaagat gcagtcacac ttaattcccg aaaaaactcc tcgatccatc 900 ttcgtttatt tcagaggatt gttttatgat gtgggaaatg accctgaggg tggttattat 960 gcgaggggtg caagagcagc tgtatgggaa aacttcaaag acaatccgct gtttgacatc 1020 tcaacagagc acccaacaac atattatgag gacatgcaga gagcaatctt ctgcctatgc 1080 ccacttggat gggccccatg gagtccaaga ctggtggaag cagtgatatt cggttgcatc 1140 cctgtgatca tagcagacga catcgtgtta ccttttgcag atgcaatccc ttgggaagat 1200 attggtgtgt ttgtggatga gaaagatgtc ccttacctgg acacaatact cacatcgatc 1260 ccaccagagg ttatactgag aaaacagagg ttgttggcaa acccgtcgat gaaacaagcc 1320 atgctgttcc cgcaaccggc tcaaccaggg gatgcgtttc atcaagtatt gaatgggttg 1380 gctcgtaagc tgcctcatga gaggagtgtg tatctgagac caggtgagaa gctgttgaac 1440 tggacggcag gaccggtcgc tgatctgaaa ccttggtaag gaccagtgtt ggaatttgat 1500 tgaatgagct attgtttggt tggtttctgt cttctcgtgt ctgtattttg tagaatcata 1560 actttttttt gctatgtaga agggaaaaag ctttgtcatt gtaatgtaac tagaatcctt 1620 ttgacatctc acgagaaaga caagtaaaag aaaaattatt gttg 1664 // |
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