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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY052737; SV 1; linear; mRNA; STD; PLN; 759 BP.
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AC   AY052737;
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DT   06-SEP-2001 (Rel. 69, Created)
DT   06-SEP-2001 (Rel. 69, Last updated, Version 1)
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DE   Arabidopsis thaliana AT5g24420/K16H17_13 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-759
RA   Kim C.J., Chen H., Cheuk R., Koesema E., Meyers M.C., Banh J., Bowser L.,
RA   Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J.,
RA   Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B.,
RA   Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M.,
RA   Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y.,
RA   Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-759
RA   Kim C.J., Chen H., Cheuk R., Koesema E., Meyers M.C., Banh J., Bowser L.,
RA   Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J.,
RA   Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B.,
RA   Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M.,
RA   Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y.,
RA   Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (27-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Kim,C.J., Chen,H.,
CC   Cheuk,R., Koesema,E., Meyers,M.C., Shinn,P., Banh,J. Bowser,L.,
CC   Dale,J.M., Goldsmith,A.D., Jiang,P.X., Jones,T., Karlin-Neumann,G.,
CC   Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Nguyen,M.,
CC   Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Southwick,A.,
CC   Tang,C.C., Toriumi,M., Yamada,K., Yamamura, Y., Yu,G., Yu,S.,
CC   Davis,R.W.,  Theologis,A., and Ecker,J.R.
CC   Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..759
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /mol_type="mRNA"
FT                   /clone="U12542"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..759
FT                   /codon_start=1
FT                   /product="AT5g24420/K16H17_13"
FT                   /note="6-phosphogluconolactonase-like protein"
FT                   /db_xref="GOA:Q8LEV7"
FT                   /db_xref="InterPro:IPR006148"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8LEV7"
FT                   /protein_id="AAK96451.1"
FT                   /translation="MAQRKMIVFPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGD
FT                   LIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNI
FT                   YAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMAS
FT                   LFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSVAEIM
FT                   KHNNLSLPSAHLSAQVENVWYLDQAAASEL"
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SQ   Sequence 759 BP; 212 A; 191 C; 169 G; 187 T; 0 other;
     atggcgcaga ggaagatgat tgtgtttccc accaagaatg aattgtccga agcaatggct        60
     gagtacactg ccaatctctc cgccaagttc atcaaagaga aaggcctttt caccgttgtt       120
     ctctccggcg gtgacctaat cgattggctc tgcaagttgg tgcaacctcc ttatattgat       180
     tcaatcgaat ggccaaaatg gcacgtcttt tgggtcgatg agagggtttg tgcatgggaa       240
     gatccagaca gtaactacaa actcgccatg gagggttttc tctctaaggt tccgattccg       300
     gataagaaca tctacgcaat cgacaagcac ttggcggctg atggtaacgc cgagcactgc       360
     gcgacgctct acgaggagtg tctaaagaat ctggtgaaag aaaagattat cccaatatcg       420
     aaaaagacag ggtatcctga gtttgatcta caacttctag ggatgggtcc tgatggccac       480
     atggcgtctc tcttcccaaa ccatccacag atcaatgaga agcagaaatg ggtcacttac       540
     atcaccgact ctccaaaacc accaccaaag agaatcacat tcactttacc ggtcatcaac       600
     tctactttgt acaatcttat ggccatttgt gacaaagcac cggccaaatc cgtggctgag       660
     atcatgaagc acaacaacct ctcgttacct tctgctcatc ttagtgctca agtcgaaaat       720
     gtttggtacc ttgaccaagc agctgcctcc gagctctag                              759
//
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