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EBI DbfetchID AY050847; SV 1; linear; mRNA; STD; PLN; 1707 BP. XX AC AY050847; XX DT 27-AUG-2001 (Rel. 68, Created) DT 20-SEP-2002 (Rel. 73, Last updated, Version 3) XX DE Arabidopsis thaliana putative pectinacetylesterase (At3g05910) mRNA, DE complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1707 RA Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., RA Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., RA Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., RA Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., RA Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-1707 RA Yamada K., Liu S.X., Pham P.K., Banh J., Banno F., Dale J.M., RA Goldsmith A.D., Jiang P.X., Lee J.M., Onodera C.S., Quach H.L., Tang C.C., RA Toriumi M., Yamamura Y., Yu G., Yu S., Bowser L., Carninci P., Chen H., RA Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., RA Karlin-Neumann G., Kawai J., Kim C., Koesema E., Lam B., Lin J., RA Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., RA Satou M., Seki M., Shinn P., Southwick A., Tracy S.E., Shinozaki K., RA Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (08-AUG-2001) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Liu,S.X., CC Pham,P.K., Banh,J., Banno,F., Dale,J.M., Goldsmith,A.D., CC Jiang,P.X., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., CC Toriumi,M., Yamamura,Y., Yu,G., Yu,S., Bowser,L., Chen,H., CC Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Koesema,E., Lam,B., CC Lin,J., Meyers,M.C., Miranda,M., Nguyen,M., Palm,C.J., Shinn,P., CC Southwick,A., Tracy,S.E., Davis,R.W., Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation is based on the January 2002 version of the Arabidopsis CC genome submitted to GenBank. XX FH Key Location/Qualifiers FH FT source 1..1707 FT /organism="Arabidopsis thaliana" FT /chromosome="3" FT /mol_type="mRNA" FT /clone="RAFL08-13-O12 (R11215)" FT /note="This clone is in a modified pBluescript vector FT (FLC-1) as a BamHI/XhoI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..256 FT /gene="At3g05910" FT CDS 257..1504 FT /codon_start=1 FT /gene="At3g05910" FT /product="putative pectinacetylesterase" FT /db_xref="InterPro:IPR004963" FT /db_xref="UniProtKB/TrEMBL:Q9SFF6" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAK92782.1" FT /translation="MVKLLLVGFVVAGIILGTQANEYLDFNVTEIDRIEELEFGFSKYS FT SNLNPLMVGLTLIRGADSGAVCLDGTLPGYHLHRGHGSGANSWLIQLEGGGWCNNIRTC FT VYRKTTRRGSSNYMEKQLQFTGILSDKAQENPDFFNWNRVKLRYCDGASFSGDGQNQAA FT QLQFRGERIWRAAIDDLKANGMRYANQALLSGCSAGGLAAILRCDEFRNLFPGSTKVKC FT LSDAGLFLDTADVSGGRTIRNLYNGVVELQSVKNNLPRICTNHLDPTSCFFPQNLISQM FT KTPLFIVNAAYDTWQIQSSIAPTSADPSGFWHDCRLNHGKCTPAQLRFLQGFREQMLRV FT VKGFSMSRQNGLFINSCFAHCQTERQDTWFADDSPVIRKKAVAIAVGDWYFDRAEVKLV FT DCPYPCDKSCHNLVFR" FT 3'UTR 1505..1707 FT /gene="At3g05910" FT misc_difference 1691 FT /gene="At3g05910" FT /note="not present in genomic sequence" XX SQ Sequence 1707 BP; 487 A; 323 C; 362 G; 535 T; 0 other; ctttttagaa aatccttttt tataacaaat aattcctctg cttcttcttc ttcttcgttt 60 atttcacctt ttttggtttc tttagctcag aaaaagccca ttcttttttt ctattcttgt 120 ttattttaat catactgtgc gtttctacaa agtttgttcc tttcttcttc aactctctca 180 ctcacagtca cagagatctg tttcttttct ttttttgctt tcactcttct cttccagtga 240 gagagagtga gagaaaatgg tgaagctttt gttagtaggg tttgttgtgg ctggtataat 300 actgggaact caagcaaatg aatatttaga tttcaatgtg acagaaatag atcgcattga 360 ggaattagag tttggatttt ccaaatatag ctccaatttg aaccctttaa tggttggtct 420 cacccttatc agaggagctg attctggagc tgtttgtttg gatggaacat tgcctggata 480 tcacttgcac cgtggacatg gatctggagc taatagctgg ctcattcaat tggagggagg 540 aggatggtgc aacaacatca ggacctgtgt atacaggaag actactcgac gtggttcctc 600 taattatatg gagaaacagc ttcagtttac aggaatactg agtgacaaag ctcaagaaaa 660 tcctgacttt ttcaactgga atagagttaa gcttcgttac tgcgatggcg cttctttcag 720 tggagatggc cagaatcagg ctgcacaact tcagtttaga ggagagcgta tctggagagc 780 cgcaatagat gatttgaagg cgaatggaat gcgatacgcc aatcaggcac ttctctccgg 840 atgctctgct ggtggtttag cagcaatctt gcgctgcgat gagtttagga acttattccc 900 tggatcaacc aaagtcaagt gcttgagtga tgcaggcttg ttcttggaca ctgccgatgt 960 ttcaggcggc cgcacaatca ggaacttata caatggtgtc gtagaattgc agagtgtgaa 1020 gaacaatctt ccacgtatat gcacaaacca tcttgatcca acctcgtgtt tcttcccaca 1080 aaatctgatc agtcaaatga aaactccact ttttatcgtc aacgcagcat atgatacatg 1140 gcagattcaa agcagtatag ctccaacatc agctgatcct agtggatttt ggcatgactg 1200 cagactaaac catggaaaat gtactcctgc acagttgaga ttcttgcaag gattcaggga 1260 acagatgctt agagtagtca agggcttctc aatgtctaga cagaatggat tgttcatcaa 1320 ttcttgcttt gctcactgcc aaaccgagag acaagatact tggtttgccg atgattctcc 1380 tgttatcagg aaaaaggcgg tggcaatagc tgtaggagat tggtatttcg atagagcgga 1440 agtgaagtta gtcgattgcc catacccgtg tgacaagagc tgccacaact tggtgttcag 1500 atgattgttt gactatgttc tttattctct ctcatatata cataccttag aaaatttctt 1560 tctttcaaaa ggaaagattt tgtatccttt ggtagtaacc aatgcctcat tggtatatga 1620 ttaagtgtat cgtggaaaat cataataaaa aaacaaaaca aaacaaagtt tgcttaaaaa 1680 gagttcaatg gaaaaaaaaa aaaaaaa 1707 // |
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