EBI Dbfetch

ID   AY049234; SV 1; linear; mRNA; STD; PLN; 2870 BP.
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AC   AY049234;
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DT   10-AUG-2001 (Rel. 68, Created)
DT   10-AUG-2001 (Rel. 68, Last updated, Version 1)
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DE   Arabidopsis thaliana AT5g33290/F19N2_10 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-2870
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Banh J.,
RA   Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y.,
RA   Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J.,
RA   Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M.,
RA   Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y.,
RA   Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Arabidopsis cDNA clones";
RL   Unpublished.
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RN   [2]
RP   1-2870
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Banh J.,
RA   Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y.,
RA   Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J.,
RA   Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M.,
RA   Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y.,
RA   Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (23-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Cheuk,R., Chen,H.,
CC   Kim,C.J., Koesema,E., Meyers,M.C., Shinn,P., Banh,J. Bowser,L.,
CC   Dale,J.M., Goldsmith,A.D., Jiang,P.X., Jones,T., Karlin-Neumann,G.,
CC   Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Nguyen,M.,
CC   Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Southwick,A.,
CC   Tang,C.C., Toriumi,M., Yamada,K., Yamamura, Y., Yu,G., Yu,S.,
CC   Davis,R.W.,  Theologis,A., and Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2870
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL08-10-M22(R13283)"
FT                   /note="ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1665..2690
FT                   /codon_start=1
FT                   /product="AT5g33290/F19N2_10"
FT                   /note="putative protein"
FT                   /db_xref="GOA:Q94AA9"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q94AA9"
FT                   /protein_id="AAK83577.1"
FT                   /translation="MMNRFKVWTYTEGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSR
FT                   SRFRADRPENAHVFFIPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKHPY
FT                   WNRSQGGDHFMVSCHDWAPDEIDGNPKLFEKFIRGLCNANTSEGFRPNVDVSIPEIYLP
FT                   KGKLGPSFLGKSPRVRSILAFFAGRSHGEIRKILFQHWKEMDNEVQVYDRLPPGKDYTK
FT                   TMGMSKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFSIQIPVSR
FT                   IKEIKTILQSVSLVRYLKMYKRVLEVKQHFVLNRPAKPYDVMHMMLHSIWLRRLNLRLG
FT                   T"
XX
SQ   Sequence 2870 BP; 938 A; 505 C; 470 G; 957 T; 0 other;
     aaaaaaaaaa attctctctt gtcttcctct taagatgaaa gaatcataaa aggaacccaa        60
     agaaaagcaa aaacataacc atggctgctc caagatcaag aagatgctct ctttctctct       120
     taactctttt ctccatcact cttattctta tttctgtttc actctttgtc tccacaaaac       180
     cagctaataa gcctttcctc gattacagaa accagttttc tatttccatc tctatctctt       240
     ctcctcttga acaaaacaca acaaacacta gttttgtctc agcctctcct cctttgtccc       300
     ctcttggtca gagcaacaca acaaacacta ttcttgcttc ttcttcttct tcttcctctt       360
     tttctgatca ccaaaaccaa aataagtctc caagtcctac aagtaaaaaa attgttatca       420
     ggaaaagaag tgggttagac aaaatagaat cagatttagc aaaagcaaga gcagcaatta       480
     agaaggcagc ttctacacaa aattatgtca gctctctcta taaaaatcca gccgcctttc       540
     atcagttgag ttttgcaatt cttcttcttc ttcttttttt aaccatttga ggtaaaaaaa       600
     aagatttctt cttttattaa acagtaattt aatactagta cagtatttga cagttcctag       660
     atttttagtc aaatatgata gcgctgacaa tttttcacat ggattttgct gttttttcaa       720
     actatttgac atcgatttca tcaaagaatt cagcatttaa ttacggttac aataaagaca       780
     aattaaacaa atacgcaacg tacacataga gttttaacgg ctcctgtgag atgcctcttt       840
     ctaagcaaaa gtttactctt ctttttgttt gtttattttc atatccgaga ttttgcagta       900
     cataatattg gaattgagct tttgaggttt caattgaact aaaaagaagt tttaatgtat       960
     tcaactactt ttctactaaa agagtttgtt tattctcatg gcttcttttt tataacataa      1020
     ttagtttaaa agctaagatt aaaaaaggtt ttaatcatta actatgtgtt ggaaaacaaa      1080
     attaaagaaa gcttttgaac tttttgctaa tcatatttaa tttatttttt taatcaaaat      1140
     tatcaaatta ggattttttt taatagtcct tcttctcctt tttaattgat tttttagaaa      1200
     acaaaacaca cagattaaga aaacatatta aaactgatta taaatgtatt aatttttagg      1260
     atttacattt tactataatt ttaaattaat gatatttaat tatttgtttt gaagtttaaa      1320
     atttatcaat aaataactaa taaatagtaa atagtaaatc taaaaaatca attgtttgaa      1380
     acaaattgtt ttctaaaaaa ttaattaata aggaacagag agaatataca aataaaatat      1440
     tgagatgttt cttttttgtt taaagtattg agatgtttgt tcattagaat agaagactat      1500
     tcgattcttt caaaacaagt aaacaagtag gagatagaat gaatatttaa actccaatac      1560
     gaacgtggcg tagctcacct cagtgatatt attacttgct ttgtaataaa taaaacattg      1620
     atgtcatact cgtgtatgca caaaatatca ggagtcacac ggagatgatg aatcgtttta      1680
     aggtgtggac atacacagag ggagaggtcc cattgttcca tgacggccct gtgaatgaca      1740
     tttacggcat agaaggacaa ttcatggacg aaatgtgcgt ggacggaccg aagagtagaa      1800
     gccgttttcg ggcagatcga cccgagaatg ctcatgtttt cttcatacca tttagcgtcg      1860
     ccaaggtcat ccacttcgtc tacaagccca tcacctctgt cgaagggttt tcgcgggctc      1920
     gcctacaccg ccttatagag gattatgttg atgtagttgc tactaagcat ccatattgga      1980
     accgaagcca aggaggcgac catttcatgg tatcatgcca tgactgggca ccagacgaga      2040
     ttgatgggaa tccaaagttg tttgaaaaat tcattagggg actttgcaat gctaacacct      2100
     cggaaggttt ccgacctaac gtggacgtat ccattccgga gatctacctt cctaaaggta      2160
     aattgggtcc gtcttttctc gggaaatcac cgcgagttcg atctatactc gcatttttcg      2220
     ctggaagaag tcacggtgaa atccgaaaaa tcttatttca acattggaaa gaaatggaca      2280
     atgaagtcca agtctatgat cgtcttccgc caggaaaaga ctatacaaaa actatgggaa      2340
     tgagtaagtt ttgtctgtgt ccgagtggtt gggaggtcgc tagcccgagg gaggtcgagg      2400
     cgatatatgc tggttgtgta ccagtgatca tatcggataa ttattcatta ccattcagtg      2460
     atgtgctgaa ttgggattcc ttctccatac aaatccctgt ttctaggata aaagagatca      2520
     aaaccattct acaaagtgtc tctctcgtaa gatacttgaa gatgtataag agagttttag      2580
     aagtgaagca gcatttcgtg ttgaatcgtc cagctaaacc ctacgatgtg atgcatatga      2640
     tgcttcattc gatctggtta agacgactta atcttaggct tggtacatag tatacaattt      2700
     tttgttatgt tgcaaataaa tattaagtgt ctaagttcat atgagttact agctttgtat      2760
     tctttccata aatttgcata gttctctctt gtaaaaaaat atacaacaac aaacacaata      2820
     tcaaagattt ccttattaat aagagaaaca aagcatttgt tatttttgtt                 2870
//