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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY047534; SV 1; linear; mRNA; STD; INV; 1462 BP.
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AC   AY047534;
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DT   31-JUL-2001 (Rel. 68, Created)
DT   18-AUG-2001 (Rel. 68, Last updated, Version 2)
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DE   Drosophila melanogaster GH04269 full length cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1462
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M.,
RA   Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J., Pacleb J.,
RA   Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E.,
RA   Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (19-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone.  However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1462
FT                   /organism="Drosophila melanogaster"
FT                   /map="60B6-60B6"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /clone="GH04269"
FT                   /db_xref="taxon:7227"
FT   CDS             258..1427
FT                   /codon_start=1
FT                   /gene="CG3253"
FT                   /product="GH04269p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0041706"
FT                   /db_xref="GOA:Q9W1A7"
FT                   /db_xref="UniProtKB/TrEMBL:Q9W1A7"
FT                   /protein_id="AAK77266.1"
FT                   /translation="MDGFVVPNNSASLAFDNINLSYGRWDNQLLYRIKDFALLGEQYVD
FT                   SSEGSLVCLATQTSVERLNSLPQVAANWQGKMSVALFAAGPEEFVVLQYFVTYMRLCFA
FT                   NIRENATFHLLTPRDFDKLPRVAALPLNMRGKFDCQYPDRTLKALLKFRSLKTLQWRQR
FT                   NTYPQNHMRNLARKGCQTKYVFLTDIDIVPSTNSVPQLNHFFRTANCTKSCAYVIPTFE
FT                   IDVRATFPRSKNALVRLIRKGLARPFHEKVFIYNQYATNFSKWLSPNTNETEVSVSHVV
FT                   TNFEFLYEPFYIAVDNAPAHDERFLGYGFTRNSQVYEMHIAGYQFYVLSPVFTGHWGLQ
FT                   RKQARPAWREQQNNANRRKFDVFKSEIFVRYKNDPRLLLKAKKNQILVK"
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SQ   Sequence 1462 BP; 382 A; 399 C; 347 G; 334 T; 0 other;
     ttattaaggt tgtgttttcc tgataaataa ctgcattgtg atactcgatt gctcgaatga        60
     tgtgccacat atcaaactgg agttccctga aaatagtgct ggcctttctc tcggtcaaca       120
     tcttctggct cctgaaggtg tatcccccgg caggagatgg tgcgcagagg tgtccgccca       180
     ctccccaaag tcccgtggcc gtagagtgtc cctagcattc ggatatcgcc tatgcgctgc       240
     tccagccgct taacaacatg gacggcttcg tggtcccgaa caactccgcg tctctggcct       300
     tcgataacat caacttgagc tacggccgct gggacaacca gctgctgtac aggatcaaag       360
     actttgctct gctaggcgag cagtacgtag actcctcgga gggcagcttg gtgtgcctgg       420
     ccacccagac ttcagtggag cgcctcaact cgcttcccca ggtggcagcc aattggcagg       480
     gcaagatgtc cgtggccctg tttgcagctg ggcccgagga gtttgtagtc ctgcaatact       540
     tcgttaccta tatgcgcctg tgcttcgcaa acatacgcga gaatgccacc tttcacttgc       600
     tcacaccgag ggacttcgac aagctgcccc gagtagccgc acttcccctt aacatgaggg       660
     gcaaattcga ctgccagtac ccggatagga cgctcaaggc cctgctcaag ttccgctccc       720
     tgaagaccct gcagtggcga cagaggaaca cctatccgca gaaccacatg aggaacctgg       780
     cacgcaaggg gtgccagacg aagtacgtct ttctcaccga catcgacatt gttcccagca       840
     ccaacagtgt gccccagctg aaccacttct tcaggacagc caattgcacg aagagttgtg       900
     cctacgtaat ccccacattt gaaatagacg ttagggctac gtttccccgc tccaagaatg       960
     cgttagtgcg cctgataagg aaaggactag ctaggccttt tcacgaaaag gtcttcatct      1020
     ataaccaata tgccactaat ttctccaagt ggctgtcccc caacacaaat gaaacggaag      1080
     tatccgtcag ccatgttgta acgaactttg aattcctgta tgaaccattc tacatagcag      1140
     tggacaacgc accagcgcac gacgaacgat ttctgggtta tgggttcacc aggaactccc      1200
     aggtttatga gatgcacatt gctggctatc agttctacgt cctttcccct gtgtttaccg      1260
     gtcattgggg attgcagagg aagcaggcca gacccgcttg gcgggagcaa cagaataatg      1320
     cgaatcgccg gaagttcgac gttttcaaaa gcgaaatatt cgtgcggtac aaaaacgatc      1380
     cacgcctgct gttaaaggcc aaaaagaatc aaatcctagt aaaataaata aaatagttaa      1440
     aattaaaaaa aaaaaaaaaa aa                                               1462
//
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