EBI Dbfetch

ID   AY037793; SV 1; linear; mRNA; STD; INV; 1565 BP.
XX
AC   AY037793;
XX
DT   31-AUG-2001 (Rel. 69, Created)
DT   03-JAN-2002 (Rel. 70, Last updated, Version 2)
XX
DE   Caenorhabditis elegans GLY-1 (gly-1) mRNA, gly-1(+) allele, complete cds.
XX
KW   .
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
XX
RN   [1]
RP   1-1565
RX   DOI; 10.1093/glycob/11.11.979
RX   PUBMED; 11744632.
RA   Warren C.E., Krizus A., Dennis J.W.;
RT   "Complementary expression patterns of six nonessential Caenorhabditis
RT   elegans core 2/I N-acetylglucosaminyltransferase homologues";
RL   Glycobiology 11(11):979-988(2001).
XX
RN   [2]
RP   1-1565
RA   Warren C.E., Krizus A., Dennis J.W.;
RT   ;
RL   Submitted (31-MAY-2001) to the EMBL/GenBank/DDBJ databases.
RL   Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University
RL   Avenue, Toronto, ON M5G 1X5, Canada
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1565
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /map="+3.07"
FT                   /strain="N2"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:6239"
FT   misc_feature    1
FT                   /gene="gly-1"
FT                   /note="trans-spliced leader sequence SL-1 splice site"
FT   CDS             91..1509
FT                   /codon_start=1
FT                   /gene="gly-1"
FT                   /product="GLY-1"
FT                   /note="similar to core 2/I GlcNAc-T"
FT                   /db_xref="GOA:Q20406"
FT                   /db_xref="InterPro:IPR003406"
FT                   /db_xref="UniProtKB/TrEMBL:Q20406"
FT                   /protein_id="AAK94758.1"
FT                   /translation="MKKKHPKTIRNLFRLKFCCLQLGMNVRRFKIISQFLYSSFTVYIV
FT                   LRLGFVDYSLVPENRKLENIPLECNSVINGTENRRKISRARQWDWHFDWVEHEIFNSRN
FT                   VCSTIDKYFNFTRIPSSREEAEYPLAYGLVVYKTIVQVLTQMSLFYQPQHMFCITVDDQ
FT                   SPNEYKSVIQALPSCFPNMHVFIGEPSQWGSFGILKNVYTCFNWLSKSKQKWKYYQYLS
FT                   GTDLPIRTNLEMVRIFKALNGSMNTDVSTFEVDRYKNMEGVLPPMPVYKSSMSVVVPRE
FT                   GADYLISSPRVQKLLKYLSKTWIPDESFWSTVLGSPALLPVPGSIRVRDILWLRKNFKL
FT                   RPPYENTVNSIGTSYIGRYQVWGWQKECFGKVKDFSCVFGVEDIEEIMTRPELVAHKLY
FT                   LEFQPAAFMCMLKEVRRRSLSPDAHLFSARSYSQMPTVELYQGKAITQLTNPNWLVRDS
FT                   FYNPQHEDFDKEVL"
FT   polyA_signal    1544..1549
FT                   /gene="gly-1"
FT   polyA_site      1565
FT                   /gene="gly-1"
XX
SQ   Sequence 1565 BP; 510 A; 283 C; 319 G; 453 T; 0 other;
     gacgaaacat aaagggcacc aacacatcca cggaatcaag tttcgttgag agacaaagat        60
     ggcagatgaa cgataagagt acgtggaaga atgaaaaaga agcatcctaa aacaattcga       120
     aatctgttcc gtttaaaatt ttgttgtctt caattgggca tgaatgtgag acgattcaaa       180
     attatttcac aatttcttta ctcaagtttt actgtctata ttgtgcttcg actgggattt       240
     gtggattata gtcttgtacc ggagaatcga aagcttgaga acattccact tgagtgcaat       300
     tctgtgataa acggtaccga aaaccgacga aaaatatcca gagcgaggca atgggattgg       360
     cattttgatt gggttgagca tgaaatattt aattcgagaa atgtttgctc cacaatcgac       420
     aagtacttca atttcacccg gattccatca tcccgagaag aagctgaata ccctctggca       480
     tatggtcttg tagtttataa aactattgtt caagtactaa cgcaaatgtc tctgttctat       540
     caaccacaac atatgttctg tattactgta gatgatcaga gtccgaatga atacaaatct       600
     gtcatacaag cactgccgtc atgcttcccg aatatgcatg tctttatcgg cgaaccatcc       660
     caatggggat cttttggaat tctgaaaaac gtgtacacat gcttcaactg gctatccaaa       720
     tcaaagcaaa agtggaaata ttatcaatat ctatcaggaa ctgatcttcc gattcgaaca       780
     aatctagaaa tggttagaat attcaaagca ttaaatggtt caatgaatac agatgttagc       840
     acttttgaag tcgatcggta taagaacatg gagggtgttc ttccaccaat gccagtgtac       900
     aaatcgagta tgtcagttgt agttccacga gaaggagctg actatttgat ttccagccca       960
     cgagttcaga aattgctgaa atatttgtca aaaacatgga ttccagatga atcattttgg      1020
     tctaccgtac tgggatcccc ggctttgctc ccagtccccg gatcaattcg agttcgagat      1080
     attctatggt tacgtaaaaa cttcaaactt cggcctccat atgagaacac agttaattca      1140
     attggaacat cctatattgg aagatatcaa gtatggggat ggcagaagga atgttttgga      1200
     aaagtcaagg atttctcgtg tgtatttggt gtggaggata ttgaagaaat aatgacaaga      1260
     cctgaactag ttgctcataa actttatctc gaatttcagc cggctgcttt tatgtgtatg      1320
     cttaaagaag tccgtcgtcg aagtttaagc ccagatgctc acctgttcag cgcaaggagt      1380
     tattctcaaa tgccgactgt agaattatat caagggaagg caataactca gttgacaaat      1440
     ccaaattggc tagtcagaga ctcattctac aatccacagc atgaagactt tgataaagaa      1500
     gttttataga aatttttagt tgtttttaga agaaaaaaag ttagataaaa cgaaaaatac      1560
     aggtt                                                                  1565
//