EBI Dbfetch

ID   AY033477; SV 1; linear; genomic DNA; STD; PRO; 2001 BP.
XX
AC   AY033477;
XX
DT   12-FEB-2002 (Rel. 70, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Thermotoga neapolitana beta-mannanase (man5) gene, complete cds.
XX
KW   .
XX
OS   Thermotoga neapolitana
OC   Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.
XX
RN   [1]
RP   1-2001
RX   DOI; 10.1002/bit.10020
RX   PUBMED; 11590605.
RA   Parker K.N., Chhabra S.R., Lam D., Callen W., Duffaud G.D., Snead M.A.,
RA   Short J.M., Mathur E.J., Kelly R.M.;
RT   "Galactomannanases Man2 and Man5 from Thermotoga species: growth physiology
RT   on galactomannans, gene sequence analysis, and biochemical properties of
RT   recombinant enzymes";
RL   Biotechnol. Bioeng. 75(3):322-333(2001).
XX
RN   [2]
RP   1-2001
RA   Parker K.N., Chhabra S.R., Lam D., Callen W., Duffaud G.D., Snead M.A.,
RA   Short J.M., Mathur E.J., Kelly R.M.;
RT   ;
RL   Submitted (26-APR-2001) to the EMBL/GenBank/DDBJ databases.
RL   Chemical Engineering, North Carolina State University, Room 3309, 840 Main
RL   Campus Drive, Raleigh, NC 27606, USA
XX
DR   CABRI; DSM 5068.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2001
FT                   /organism="Thermotoga neapolitana"
FT                   /strain="DSM 5068"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:2337"
FT   CDS             1..2001
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="man5"
FT                   /product="beta-mannanase"
FT                   /db_xref="GOA:Q9RIK7"
FT                   /db_xref="HSSP:1OF4"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RIK7"
FT                   /protein_id="AAK53459.1"
FT                   /translation="MRKLVFSFLIVTLPIVLFANSDFVKVENGRFILNGEEFRFVGSNN
FT                   YYMHYKSNRMIDSVLESAKAMGVKVLRIWGFLDGESYCRDKNTYMHPAPGVFGLPEGTN
FT                   AQDGFERLDYTVAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGIHHDDFYRNEKIKE
FT                   EYKKYVSFLINRVNTYTGVPYREEPTIMAWELANEPRCETDKSGNTLVEWVEEMSAYIK
FT                   SLDPNHLVAVGDEGFFNNYEGFRPYGGEAEWAYNGWSGVDWKRLLEIETVDFGTFHLYP
FT                   SHWGVSPENYAQWGAKWIEDHIKIAKEVGKPVVLEEYGIPKSAPVNRVAIYKLWNDLVY
FT                   NLGGNGAMFWMLAGIGEGWDRDEKGYYPDYDGFRIVNDESEEAKLIREYAKLFSTGEDT
FT                   REDTCMFITPKDGQEIKKTVKVRVGVFDYSNTFKGISVGVENLLFEDEIKHLGYGVYGF
FT                   EFDTTRISDGEHEMFLEAHFRGETVKDTIRVKVVNRAQYVLAEEVDFSRPEEVKNWWNS
FT                   GTWQAEFKTPDIEWNGEVGNGALQMNVVLPGKGDWEEVRVVRKFDQLPVCEILEYDIYI
FT                   PDVEGLTGRLRPYAVLNPGWVKIGLDMNNTSIDSGELVSFDGKKYRKFHVRIEFDKTPG
FT                   VNELHIGVVGDHLEYDGPIFIDNVRLYKKSS"
XX
SQ   Sequence 2001 BP; 598 A; 394 C; 580 G; 429 T; 0 other;
     atgagaaaac ttgtgttctc atttttgatt gtgacattgc ccatcgtcct ctttgcaaac        60
     agtgatttcg tgaaagtgga aaacggcagg ttcatactga acggagaaga gttcagattc       120
     gttggaagca acaactacta catgcactac aagagcaatc gaatgataga cagtgtcctt       180
     gaaagtgcaa aagccatggg ggtgaaggtg ctcagaattt ggggattcct cgatggtgag       240
     agttactgcc gtgacaagaa cacctacatg caccccgcac cgggagtatt tggattgcca       300
     gagggtacga acgctcagga cggttttgaa agactcgact acacggtagc gaaagcaaaa       360
     gaactgggca taaagctcat aatcgttctt gtgaacaact gggacgactt cggtggaatg       420
     aatcaatacg tgagatggtt tgggggcatc catcacgatg acttctacag gaacgagaag       480
     atcaaagaag aatacaaaaa gtacgtgtct ttcctcataa acagggtgaa cacctacacg       540
     ggtgttcctt acagggaaga gcccaccatc atggcatggg aactggcgaa cgagcccagg       600
     tgtgaaacgg acaagtctgg taacacactc gttgaatggg tagaggagat gagtgcttac       660
     ataaagagtc tggatccaaa ccacctggtt gccgtgggag acgagggatt cttcaacaac       720
     tacgaaggct tcagacctta cggtggagag gctgagtggg cctacaacgg atggtccggt       780
     gttgactgga agagacttct ggagatagag acggtggatt ttggtacgtt ccatctctac       840
     ccctcccact ggggtgtgag ccctgaaaac tacgcacagt ggggggcaaa gtggatagaa       900
     gatcacataa agatcgcaaa agaggttgga aaacccgtcg ttctggaaga gtacggtatt       960
     cccaaaagtg ccccggtcaa cagggttgcc atttacaaat tgtggaacga tctggtctac      1020
     aacctcggtg gaaacggtgc catgttctgg atgctcgcag gaatcggtga aggatgggac      1080
     agagacgaaa agggttacta ccccgattac gacggcttca gaatagtgaa cgatgaaagt      1140
     gaagaggcaa agttgatcag agagtacgcg aaactgttca gcacgggtga ggatacgagg      1200
     gaagatacct gcatgttcat cacaccaaag gatggtcagg agatcaaaaa gactgtgaag      1260
     gtgagagtgg gtgtcttcga ctacagcaac acgttcaaag gaatttccgt cggggttgaa      1320
     aatctgctct ttgaagatga gataaaacat ctcggatatg gagtttacgg attcgaattt      1380
     gacacaacgc ggatttcaga cggagaacac gagatgttcc ttgaggcaca tttcagggga      1440
     gaaacggtga aagacacaat cagggtgaaa gttgtgaaca gagcgcagta tgtactcgca      1500
     gaagaagtgg atttttccag acccgaagaa gtcaagaact ggtggaacag cggaacatgg      1560
     caggctgagt tcaaaacacc cgatatagag tggaacggtg aggtggggaa cggtgctctc      1620
     cagatgaacg tggtgcttcc cggaaagggt gactgggaag aggtgagggt ggtcaggaaa      1680
     ttcgatcaac tccccgtgtg tgagatcctc gagtacgata tctacatacc agacgttgaa      1740
     gggcttacag gaaggctcag accgtacgcg gtgctgaatc ccggctgggt gaagataggg      1800
     ctcgacatga acaacacctc gattgacagc ggagaacttg tcagtttcga tggcaaaaag      1860
     tacagaaagt tccatgtgag gatcgagttc gacaagacac ctggagtgaa cgagctccac      1920
     ataggtgtag ttggagacca cctggagtat gatgggccga ttttcatcga taatgtgagg      1980
     ctctataaaa aatcttcttg a                                                2001
//