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EBI DbfetchID AY005483; SV 1; linear; mRNA; STD; MUS; 6829 BP. XX AC AY005483; XX DT 31-MAY-2001 (Rel. 67, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Mus musculus Down syndrome cell adhesion molecule (Dscam) mRNA, complete DE cds. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-6829 RX DOI; 10.1006/bbrc.2001.4420 RX PUBMED; 11237714. RA Agarwala K.L., Ganesh S., Amano K., Suzuki T., Yamakawa K.; RT "DSCAM, a highly conserved gene in mammals, expressed in differentiating RT mouse brain"; RL Biochem. Biophys. Res. Commun. 281(3):697-705(2001). XX RN [2] RP 1-6829 RA Agarwala K.L., Suzuki T., Amano K., Yamakawa K.; RT ; RL Submitted (24-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Neurogenetics, RIKEN Brain Science, 2-1, Hirosawa, Wako-shi, Saitama RL 351-0198, Japan XX DR ASTD; TRAN00000138239. XX FH Key Location/Qualifiers FH FT source 1..6829 FT /organism="Mus musculus" FT /chromosome="16" FT /map="16C" FT /strain="ICR out-bred" FT /mol_type="mRNA" FT /db_xref="taxon:10090" FT CDS 460..6501 FT /codon_start=1 FT /gene="Dscam" FT /product="Down syndrome cell adhesion molecule" FT /note="DSCAM" FT /db_xref="GOA:Q9ERC8" FT /db_xref="HSSP:1F97" FT /db_xref="InterPro:IPR013783" FT /db_xref="MGI:1196281" FT /db_xref="UniProtKB/TrEMBL:Q9ERC8" FT /protein_id="AAF99440.1" FT /translation="MWILALSLFQSFANVFSEEPHSSLYFVNASLQEVVFASTSGTLVP FT CPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTA FT ENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKD FT TVSLVSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPAN FT SAPSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIE FT NSRPSDSGSYVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGN FT EDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQ FT VVLEDGTPKIISAFSEKVVSPAEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQM FT ITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIA FT GRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCN FT VLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGR FT PIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVV FT QPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLI FT KHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQRKEMSCTAH FT GEKPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSY FT GEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWD FT SAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQ FT EVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDTTGDSEV FT YTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISI FT SWSTLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQVL FT AFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVF FT CSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKA FT PARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGS FT FIIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPG FT DNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGR FT ISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTV FT WTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATLNYDGSTIPPLIKS FT VVQSEEGLTTNEGLKILVTISCILVGVLLLFVLLLVVRRRRREQRLKRLRDAKSLAEML FT MSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDADFGEAAKQ FT KSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGPTARNRYASQWTLNRPH FT PTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELA FT RAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTSSTPSESGICRFTAS FT PPKPQDGGRVVNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSRDLSLGQACLEPQK FT SRTLKRPTVLEPTPMEASSSTSSTREGQQSWQQGAVATLPQREGAELGQAAKMSSSQES FT LLDSRGHLKGNNPYAKSYTLV" XX SQ Sequence 6829 BP; 1744 A; 1926 C; 1817 G; 1342 T; 0 other; caggcaggga agggcagcac aggggacccg gcgcccgagg ccgccgcagc aggatgagcc 60 tggccgcgcg cctgctgcct ggctgcggag ggtgaggccg gcgcccggga ggccgccgcc 120 tggccgcgct gcgcatcggg gggcgcccgg catgagctcg cgcccgcggc tgcggctgtg 180 cgcccgcgcc tggctgcccg cggcccgctg agccgagccg agcgcacggc gcacctgggc 240 tgtgtccgcg gcgcggggcg cggcgcccgg gagcaggtgt gcgggggcgc agcaagcggg 300 gagcgcggct gggcggctgg gcggcccccg ggcaggtggc gggcggcaag cggagccggg 360 ccgggcgcgg cggagcgcag cgcagcgcgg ggggcgaggc cggcgcgtgg ctcgctcgct 420 ggctcgctgg ctcgcgggag gccgggcagc agcaggggca tgtggatact ggctctctcc 480 ttgttccaga gcttcgcgaa tgttttcagt gaagagcccc actccagcct ctactttgtc 540 aatgcatcgc tgcaagaggt agtgtttgca agcacatcgg ggacgctggt gccctgcccg 600 gctgcaggca tccctcctgt gactctcaga tggtacctag caacgggcga ggagatctac 660 gatgtccccg ggatccgcca cgtccatccc aatggcactc tccaaatttt cccctttcct 720 ccttcaagct tcagcacctt aatccatgat aatacttact attgcacagc tgaaaaccct 780 tcagggaaaa ttagaagtca ggatgtccac atcaaggctg ttttacggga gccctataca 840 gtccgtgtgg aggaccagaa aaccatgaga ggcaatgtcg cggtgttcaa gtgcattatc 900 ccctcctcgg tggaggcgta cgtcactgtc gtctcatggg agaaagacac ggtttcactt 960 gtctcaggat ctagatttct catcacatcc acgggagcct tgtatattaa agatgtacag 1020 aacgaagatg ggctgtacaa ctaccgctgc atcacgcggc acagatacac aggggagacg 1080 agacaaagca acagcgcgag actgttcgtg tcagacccag caaactcagc cccatccatc 1140 ctggacgggt ttgaccaccg caaagccatg gcagggcagc gcgtggagct gccttgcaaa 1200 gcacttgggc accccgagcc agactaccgc tggctgaagg acaacatgcc cctggaactt 1260 tctggaaggt tccaaaagac agtgactggg ttgctcattg agaacagccg cccctcagac 1320 tcaggcagct atgtgtgtga agtatccaac cgatatggca ctgccaaggt gataggccgc 1380 ctgtacgtga aacagccact gaaagccacc atcagtccca gaaaggttaa aagcagcgtg 1440 ggcagccagg tctccttatc ctgcagtgtg acaggaaatg aagaccagga actctcctgg 1500 taccgaaatg gcgaaatcct caaccctgga aaaaacgtga ggatcacagg actcaaccac 1560 gcaaacctta taatggatca catggtcaag agtgatgggg gtgcctacca gtgctttgtg 1620 cgcaaggaca agctatctgc tcaagactat gtccaggtgg tccttgaaga cggaactccc 1680 aaaatcattt ctgcctttag cgagaaagtg gtgagcccgg cagagccagt gtccctcgtg 1740 tgcaatgtga agggtacacc cttgcccacg gtcacctgga ccctggacga tgaccccatc 1800 ctcaagggca gcggtcaccg catcagccaa atgatcacgt ccgaggggaa cgtggtcagc 1860 tacctgaata tctccagctc ccaggtccgg gatgggggtg tctaccgctg cactgccaac 1920 aactcggctg gagtcgtcct gtaccaggct cgaataaacg taagagggcc tgcaagcatc 1980 agaccaatga aaaacatcac tgcgatagcg gggcgtgaca cgtacatcca ctgccgcgta 2040 attggctatc cgtattactc catcaagtgg tacaagaacg ctaacctgct tcctttcaac 2100 caccgccagg tggcgtttga gaacaatggg actctgaaac tctctgatgt gcagaaagaa 2160 gttgacgagg gagagtacac gtgtaatgtg ctggtacagc cacagctctc caccagccag 2220 agtgtccacg tgacagtgaa agttccacct ttcatccaac cttttgagtt cccaagattc 2280 tccatcgggc agcgggtttt catcccatgt gtggtggtct caggggactt acccatcacc 2340 atcacctggc agaaggatgg ccggccaatt ccagcaagcc tcggagtaac cattgacaac 2400 attgacttca ccagctccct gaggatctcc aacctctccc taatgcacaa tgggaattac 2460 acctgcattg cgagaaacga ggcagcagcc gtggaacacc agagtcagct gattgtgaga 2520 gttcccccta agttcgtggt acagccccgg gaccaggacg ggatctatgg caaagcagtg 2580 attctcaatt gctctgcaga gggttatcct gtgcctacaa ttgtgtggaa attctcaaaa 2640 ggtgctgggg tcccccagtt ccagccaatt gccttgaatg gccgaatcca ggtcctgagt 2700 aatggctcac tcttgatcaa gcatgttgta gaagaagaca gtggctacta cctctgcaag 2760 gtcagcaacg atgtgggcgc agacgtcagc aagtccatgt acctcacagt gaaaattcct 2820 gccatgataa cctcttaccc caacaccacc ctggccactc agggtcaaag gaaggaaatg 2880 agctgcacag cccatgggga gaagcccatc attgtccgct gggagaaaga ggacaggatc 2940 attaaccctg aaatggcccg ctacctggta tccaccaagg aggtgggaga ggaagtgata 3000 tctacgctgc agattttgcc aacagtgaga gaagattccg gtttcttctc ctgccatgct 3060 atcaattcat acggggagga ccgtggaata attcaactca cagtgcaaga acccccagat 3120 cctcccgaga ttgagatcaa agatgtcaaa gctcgcacca tcacgctcag gtggaccatg 3180 gggtttgatg gcaacagccc catcacaggc tatgacattg aatgcaaaaa taaatcagac 3240 tcctgggatt ctgctcaaag aaccaaagat gtttcccctc agctgaactc ggccaccatc 3300 attgatatcc acccttcctc cacctacagc atccgcatgt acgccaagaa ccggattggc 3360 aagagtgagc ccagcaacga gatcaccatc acggcggatg aggcagctcc tgatggtcca 3420 cctcaggaag ttcacttgga acccacctca tctcagagta tcagggttac ctggaaggct 3480 cccaagaaac acttacaaaa cgggatcatt cgcggctacc aaataggcta ccgggagtac 3540 agcacggggg gtaacttcca gttcaacatc atcagtatcg acaccaccgg ggacagcgaa 3600 gtgtacaccc tggacaacct gaataagttc acgcagtatg gcctggtagt acaggcttgc 3660 aaccgggccg gcacaggacc ttcttctcag gagatcatta ccaccactct ggaggatgta 3720 cccagctacc ctcctgaaaa tgtccaagcc atagcaacct caccagaaag catatcaatc 3780 tcctggtcca cactgtccaa ggaggccttg aatgggattc tccaggggtt cagggtcatc 3840 tactgggcca acctcataga cggagagctg ggcgagatta agaacgtcac caccacgcag 3900 ccttccttgg agttggatgg actagagaaa tacaccaact acagtatcca ggtcctggcc 3960 ttcacccgtg caggggatgg cgtccggagc gagcagatct ttacccgtac caaggaggac 4020 gttccaggtc ctcctgccgg tgtcaaggcg gcggcagcct cggcctccat ggtcttcgtg 4080 tcctggctgc ccccgctgaa gctgaacggc atcattcgga agtacacagt gttctgctcc 4140 catccctacc ctaccgtcat cagtgagttt gaagcctccc ctgactcatt ttcctacaga 4200 atccctaatc tgagtcggaa tcggcagtat agcgtctggg tggtggcggt gacttccgcc 4260 ggaagaggca acagcagcga gatcatcact gtggagcccc tagctaaagc tcctgcacgg 4320 atcctcacgt tcagcgggac agtgactact ccatggatga aggacattgt cttgccttgt 4380 aaagctgttg gagacccgtc acctgccgta aaatggatga aggatagtaa cgggacaccc 4440 agcctggtga cgattgatgg ccgcaggagc atcttcagca atgggagttt catcattcgg 4500 acggtgaaag cagaggactc tggctattac agctgtgttg ccaataacaa ctggggatca 4560 gatgagatca tattaaattt gcaagtacaa gttccaccag atcagcctcg gctcaccgta 4620 tccaagacga catcctcctc catcaccctc tcctggctcc ctggagataa tgggggtagc 4680 tccattagag gctacatcct gcaatactcc gaggataaca gtgagcagtg gggcagcttt 4740 cccatcagcc ccagcgagcg ttcataccgc ttggaaaacc taaagtgtgg gacttggtat 4800 aagttcaccc ttactgccca aaatggagta ggtcccgggc gcataagtga aatcatagaa 4860 gccaaaaccc tggggaaaga accccagttc tccaaggagc aggagctctt cgccagcatc 4920 aataccaccc gagtgaggct gaatctgatt ggctggaatg acggcggctg tccaatcacc 4980 tcattcactc ttgaatacag accctttggg accacggtct ggaccacagc tcagcggacc 5040 tccctttcca agtcctacat tctgtatgac ctgcaagaag ccacgtggta tgaactgcag 5100 atgagagtgt gcaacagcgc cggctgtgcg gagaagcaag ccaacttcgc cacgctgaac 5160 tacgatggca gtacaatccc tccactcatt aagtcagttg tccaaagcga agaagggctg 5220 acaaccaacg aagggctcaa gatcctcgtg accatctcct gcatcctggt cggggttcta 5280 ctgctctttg tgcttctgct ggttgtgcgg aggagacggc gagagcagag gctgaagagg 5340 ctgagagatg caaagagttt agctgaaatg ctcatgagca aaaacacacg gacttcagat 5400 accttaagca aacagcagca gactttgaga atgcacattg atatacccag ggctcagctt 5460 ttgattgaag agagagacac aatggagacc atagatgacc gctccacagt cctgttgacg 5520 gatgctgact tcggggaggc agccaaacag aagtcactga cagtgactca cacggtgcat 5580 taccaatcgg tgtctcaggc caccgggccc ctcgtggatg tctccgatgc tcggccagga 5640 acgaatccca ccaccaggag gaatgcaaag gctggaccca cagcgagaaa ccggtacgcc 5700 agccagtgga cgctcaacag accccatcct accatctctg cacacaccct caccacagac 5760 tggagactgc ctacacccag ggctacagga tccgtggaca aggagagcga cagctacagc 5820 gtcagcccat cacaagacac agaccgagca agaagcagca tggtctccac agaaagtgcc 5880 tcctctacct acgaagaact ggccagggcc tatgaacacg ccaagatgga agagcagctg 5940 aggcatgcca agttcaccat cacagagtgc ttcatatccg atacgtcctc cgagcagttg 6000 acggcaggga caaatgagta cacggacagt ctgacctcca gtaccccttc agaatcgggg 6060 atctgcagat tcactgcatc tccccccaaa cctcaggatg gaggacgagt ggtgaacatg 6120 gcggttccaa aggcccatcg gccaggcgac ctcatacacc tgcctccata cctacgaatg 6180 gacttcttgt taaaccgggg cgcaccaggc accagcaggg acctgagttt aggacaagcg 6240 tgcttggaac cccagaaaag tcggaccctg aaacgcccca cggtccttga gcccacccct 6300 atggaggcct cctcctccac ctcttccacg cgagaaggac agcagtcgtg gcaacaaggg 6360 gctgtggcca ccttacctca gcgagagggt gcagagctgg gacaggcagc taaaatgagc 6420 agctcccaag agtcactgct ggactcccgg ggccatttga aaggaaacaa tccctacgca 6480 aaatcttaca ccttggtata acacatggca cctgatggac agcggttgta aatacaattt 6540 aaacgagcca atcaaagcta cctttttttt actgaattcc gatatttata attaaagaaa 6600 attgccaaaa tatattaaaa aaaaaagaag aaagaaagaa agaaagaaag aaaatactga 6660 aaccacagac agcgcaaaga ctactctgct tttttttccg tctgagtgtg ggctccatct 6720 gcctgggcat ctgagttttg gggaaagaag tccagtttta tgattttcac aggctatagc 6780 atttttactg attttctaca aagtgcatgg ggactcatta aaccttctg 6829 // |
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