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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM903381; SV 1; linear; mRNA; STD; VRT; 906 BP.
XX
AC   AM903381;
XX
DT   01-DEC-2007 (Rel. 94, Created)
DT   08-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Callorhinchus milii partial mRNA for putative alpha2,8-sialyltransferase
DE   (siat8D gene)
XX
KW   alpha2,8-sialyltransferase; siat8D gene.
XX
OS   Callorhinchus milii (ghost shark)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC   Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus.
XX
RN   [1]
RP   1-906
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (29-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite des Sciences et Technologies, UGSF, UMR CNRS
RL   8576, Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Petit D., Mollicone R., Delannoy P., Petit J.M.,
RA   Oriol R.;
RT   "Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene
RT   family: tandem duplications in early deuterostomes explain most of the
RT   diversity found in the vertebrate ST8Sia genes";
RL   BMC Evol. Biol. 8:258-258(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..906
FT                   /organism="Callorhinchus milii"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7868"
FT   CDS             <1..906
FT                   /codon_start=1
FT                   /gene="siat8D"
FT                   /product="putative alpha2,8-sialyltransferase"
FT                   /db_xref="GOA:A9J649"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:A9J649"
FT                   /protein_id="CAP17328.1"
FT                   /translation="MRLTRKCCALCTISILVIFFKTKDLTRTEHQQSELGDGETSPTRL
FT                   MVNSSNKVNRKDVRPIFKHSVEGWKSNLSLVIKIRKDILRFLDAERDISVVKSSLKPGD
FT                   IIHYVLDRRRTLNISRNLHSLLPEVSPMKNKRFNACAVVGNSGILLGSGCGKEIDSHEF
FT                   VIRCNLAPLVEYTDDVGSKSDFVTMNPSVVQRAFGSLQNETDREKYWLTNKVYIKRPST
FT                   GLLMYTLATRFCDEIHLYGFWPFPKDANGTPVKYHYYDNLKYRYFSNAGPHRMPLEFKT
FT                   LKSLHDRGALKLTTGKCGQP"
XX
SQ   Sequence 906 BP; 278 A; 195 C; 211 G; 222 T; 0 other;
     atgcgcctca cccgaaaatg ctgtgccctg tgcaccataa gcatcttagt cattttcttt        60
     aaaacaaagg acttaacaag aacggagcac cagcagtcgg aactggggga tggagaaacg       120
     agtccaacca ggctgatggt taatagttcc aataaagtga atagaaagga tgttcgcccg       180
     atcttcaaac actctgtgga gggctggaaa agcaatttat ccctggttat taaaataagg       240
     aaggatattc ttcgattttt agatgcagaa cgagacatat cagtggtcaa gagcagcttg       300
     aaacctgggg atataattca ttatgtgctg gacagacgtc gcacacttaa catctcacgc       360
     aacctgcaca gccttctgcc agaagtgtcg ccgatgaaga acaagcgatt caacgcttgt       420
     gcagtcgttg gaaattcagg gattcttctg ggtagcggat gtggaaagga gattgacagc       480
     catgagtttg taataaggtg taaccttgct cctcttgtgg aatacactga tgatgttgga       540
     tccaaatctg actttgtcac tatgaatcca tccgtcgtgc aaagagcttt tggaagtctc       600
     cagaatgaga cagacagaga aaaatactgg ctgacaaaca aggtttacat caagcggccc       660
     agcacaggcc ttctcatgta cacgcttgca actcgattct gtgatgagat ccatctttat       720
     gggttctggc cctttccaaa agatgcaaat ggaacaccag ttaaatacca ttactatgat       780
     aacctgaagt acagatattt ctccaatgcc ggaccacacc gaatgccact ggagttcaag       840
     acattaaaat ctttgcatga cagaggagct ctgaaattga caacagggaa atgcgggcag       900
     ccctag                                                                  906
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