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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM901547; SV 1; linear; mRNA; STD; INV; 840 BP.
XX
AC   AM901547;
XX
DT   16-JAN-2008 (Rel. 94, Created)
DT   08-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Branchiostoma floridae partial mRNA for putative
DE   alpha-2,8-sialyltransferase (siat8 gene), isolate Bfl-20
XX
KW   alpha-2,8-sialyltransferase; siat8 gene.
XX
OS   Branchiostoma floridae (Florida lancelet)
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
XX
RN   [1]
RP   1-840
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (16-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite des Sciences et Technologies, UGSF, UMR CNRS
RL   8576, Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Petit D., Mollicone R., Delannoy P., Petit J.M.,
RA   Oriol R.;
RT   "Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene
RT   family: tandem duplications in early deuterostomes explain most of the
RT   diversity found in the vertebrate ST8Sia genes";
RL   BMC Evol. Biol. 8:258-258(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..840
FT                   /organism="Branchiostoma floridae"
FT                   /isolate="Bfl-20"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7739"
FT   CDS             <1..840
FT                   /codon_start=1
FT                   /gene="siat8"
FT                   /product="putative alpha-2,8-sialyltransferase"
FT                   /db_xref="GOA:B0BEZ6"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:B0BEZ6"
FT                   /protein_id="CAP16260.1"
FT                   /translation="EKVKQFFDPRSNISLLQSQVKPGDRIWFLESHLFWHPSVTVSQNF
FT                   HNMLPSRPPLENKHFRKCAVVGNSGILFNSGCGREIDTHDFVFRCNLPELEGHERDVGT
FT                   KSNFTTMNPSVMFTYYKDFAEPKLKERFIKRLRRLEGGILFIPAFVAKSEKHHVQWTND
FT                   IILKHNINVRTAYPSPDMEKWIRRYWKSTEYRVARPSSGMWMYTFAASLCDEVHLYGMY
FT                   PFDIDRYGRNIKYHYYDPRPFATMYGGHDMPIEFQVFKSLHEKGALRLQTDKCQASR"
XX
SQ   Sequence 840 BP; 222 A; 217 C; 209 G; 192 T; 0 other;
     gagaaggtaa agcagttctt tgaccccaga agcaacatct ccctcctcca gtcccaggtg        60
     aagccaggcg atcgcatctg gttcctagaa agccatctgt tctggcaccc gtcggtgacg       120
     gtgtcccaga acttccacaa catgctgccc tccaggccac cactggagaa taaacacttc       180
     cgcaagtgtg cagtggtggg gaactcagga attctcttca actccgggtg cggtagggag       240
     atcgacactc atgactttgt gttccggtgc aacctacccg agctggaagg ccacgagagg       300
     gacgtgggca ccaagtccaa cttcaccacc atgaacccct ccgtgatgtt tacttattac       360
     aaggattttg cagagccgaa gcttaaggaa cgctttatca agagactccg tcgtttagaa       420
     gggggaattt tgttcatacc tgcttttgtt gcaaagtcgg aaaaacacca tgtgcagtgg       480
     acaaacgaca taatcttaaa acacaatatc aacgtgcgta cagcataccc aagtccagac       540
     atggagaaat ggattagaag gtactggaag tctacagaat acagagttgc ccgcccttcc       600
     tctggaatgt ggatgtacac gtttgctgcc agtctatgtg acgaggttca cctctacggc       660
     atgtaccctt ttgatattga caggtatggt cgcaatatta aataccacta ttatgatccg       720
     cgcccattcg ccacgatgta cggtggtcac gacatgccga tcgagttcca ggtgttcaag       780
     agtctgcacg agaagggggc gctgcgtctc cagacggaca agtgccaagc atcacgatag       840
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