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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM901546; SV 1; linear; mRNA; STD; INV; 831 BP.
XX
AC   AM901546;
XX
DT   16-JAN-2008 (Rel. 94, Created)
DT   08-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Branchiostoma floridae partial mRNA for putative
DE   alpha-2,8-sialyltransferase (siat8 gene), isolate Bfl-16
XX
KW   alpha-2,8-sialyltransferase; siat8 gene.
XX
OS   Branchiostoma floridae (Florida lancelet)
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
XX
RN   [1]
RP   1-831
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (16-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite des Sciences et Technologies, UGSF, UMR CNRS
RL   8576, Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Petit D., Mollicone R., Delannoy P., Petit J.M.,
RA   Oriol R.;
RT   "Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene
RT   family: tandem duplications in early deuterostomes explain most of the
RT   diversity found in the vertebrate ST8Sia genes";
RL   BMC Evol. Biol. 8:258-258(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..831
FT                   /organism="Branchiostoma floridae"
FT                   /isolate="Bfl-16"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7739"
FT   CDS             <1..831
FT                   /codon_start=1
FT                   /gene="siat8"
FT                   /product="putative alpha-2,8-sialyltransferase"
FT                   /db_xref="GOA:B0BEZ5"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:B0BEZ5"
FT                   /protein_id="CAP16259.1"
FT                   /translation="SYSRNAVRKVIDTAKSISILRSQTHIGDVMHYDIDNHNTFNITKD
FT                   LYDLLPETSPLEGRLFNSCAIVGNSGILLGSGCGQEIDSHDFVIRCNLAPVTEYVKDVG
FT                   RKSDLVTMNPSVLPTAFGGLKEKHWEEKFVKRLRMLEHSMLWIPAFTTINGEKYVQYTN
FT                   RIILKNDLNIKTLYPTKHLAHSIRGQAKTRIKRPSTGLYMYTIATRFCQEIHLYGFFPF
FT                   TVDVNGRPVRYHYYDNGKYNFYDKRRPHSMPVEFQALRRLHDKGALRLLTDKCT"
XX
SQ   Sequence 831 BP; 224 A; 232 C; 201 G; 174 T; 0 other;
     tcatattcca gaaatgcagt ccgcaaagtg attgataccg ctaagagcat ttctatcctg        60
     cggtcccaga cgcacattgg ggatgtcatg cactacgaca tcgacaacca caacacgttt       120
     aacatcacca aggacctgta cgacctgctc cccgagacct ctcctctcga gggccgactc       180
     ttcaactcct gcgccatagt gggcaactcc gggatcctcc tggggagcgg gtgcggacag       240
     gagatcgaca gccacgattt cgtcatccgc tgtaacctcg ctcccgtgac agagtacgtt       300
     aaggacgtgg ggaggaagtc tgacttggtg accatgaacc cctctgtgct ccccacggct       360
     ttcggaggac tgaaggagaa acactgggag gagaagtttg tgaagaggct gcgcatgttg       420
     gagcactcca tgttgtggat ccccgccttc accaccatca acggggagaa atatgtgcaa       480
     tatacaaaca ggatcatcct gaagaatgac ctgaatatca agactcttta ccccactaaa       540
     cacttagcac attccatacg agggcaagcc aagaccagga tcaaacgccc aagtaccggt       600
     ctctacatgt acaccatagc caccaggttc tgtcaggaga tccacctgta tggcttcttc       660
     ccattcacag tggatgtcaa cgggcggccc gtcagatatc actactacga caatggaaag       720
     tacaacttct acgacaaaag aagacctcat tccatgccag tggagtttca ggcactgcga       780
     cggttacatg ataagggtgc tctcaggctg ctgacggaca aatgtacata g                831
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