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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM901545; SV 1; linear; mRNA; STD; INV; 834 BP.
XX
AC   AM901545;
XX
DT   16-JAN-2008 (Rel. 94, Created)
DT   08-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Branchiostoma floridae partial mRNA for putative
DE   alpha-2,8-sialyltransferase (siat8 gene), isolate Bfl-15
XX
KW   alpha-2,8-sialyltransferase; siat8 gene.
XX
OS   Branchiostoma floridae (Florida lancelet)
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
XX
RN   [1]
RP   1-834
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (16-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite des Sciences et Technologies, UGSF, UMR CNRS
RL   8576, Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Petit D., Mollicone R., Delannoy P., Petit J.M.,
RA   Oriol R.;
RT   "Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene
RT   family: tandem duplications in early deuterostomes explain most of the
RT   diversity found in the vertebrate ST8Sia genes";
RL   BMC Evol. Biol. 8:258-258(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..834
FT                   /organism="Branchiostoma floridae"
FT                   /isolate="Bfl-15"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7739"
FT   CDS             <1..834
FT                   /codon_start=1
FT                   /gene="siat8"
FT                   /product="putative alpha-2,8-sialyltransferase"
FT                   /db_xref="GOA:B0BEZ4"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:B0BEZ4"
FT                   /protein_id="CAP16258.1"
FT                   /translation="EKVKRFFDPTGKISLLKYQVKPGDRMWFLQSRIFSHSSVTVSQSF
FT                   HNMLPSRPPLENKHFRKCAVVGNSGILLNSGCGREIDTHDFVFRCNLPELKGYEKDVGT
FT                   KSNFTTMNPSVILTYYKDFVEPKLKERFINRLRRLEGGILFIPAFVATWENEHVQWTND
FT                   IIVEHNINVRTAYPSPDMEKWIAWKSTEYRVARPSSGLWMYTFAVSLCDEVHLYGMYPF
FT                   DIDRYGRNVSYHYYDPRPFATTYFGHDMPVEFQVFKSLHKEGALRLQTDKCQSSG"
XX
SQ   Sequence 834 BP; 213 A; 209 C; 213 G; 199 T; 0 other;
     gagaaggtga agcggttctt tgaccccaca ggcaaaatct cccttctcaa gtaccaggtg        60
     aagccaggcg atcgcatgtg gttcctacaa agccgtattt tctcgcactc gtcagtgacg       120
     gtgtcccaga gcttccacaa catgctgccc tcccggccac cgctggagaa taaacacttc       180
     cgcaagtgtg cagtggtggg gaactcaggc attcttctca actccgggtg cggtagggag       240
     atcgacactc atgactttgt gttccggtgc aacctaccgg agctgaaagg ctacgagaaa       300
     gacgtgggca ccaagtccaa cttcacaacc atgaacccct ccgtgatatt aacttactac       360
     aaggactttg tggagccgaa gctgaaggaa cgcttcatca acagacttcg tcgtttagaa       420
     ggaggaattt tgttcatacc tgcttttgtt gcgacgtggg aaaacgaaca tgtgcagtgg       480
     acaaacgaca tcatcgtaga acataatatc aacgtgcgaa cagcgtaccc aagtccagac       540
     atggagaaat ggatagcatg gaagtctaca gagtacaggg ttgcccgccc ttcctctggc       600
     ttgtggatgt acacgtttgc tgtcagtctg tgtgacgagg ttcacctcta tggcatgtac       660
     ccttttgata ttgacaggta tggacgcaat gttagttacc attattacga tccgcgacca       720
     ttcgccacga cgtactttgg tcacgacatg ccggtcgagt ttcaagtctt caagagcctt       780
     cataaggagg gagcgctgcg tcttcagaca gacaagtgtc aatcatcggg gtag             834
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