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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM901544; SV 1; linear; mRNA; STD; INV; 867 BP.
XX
AC   AM901544;
XX
DT   16-JAN-2008 (Rel. 94, Created)
DT   08-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Branchiostoma floridae partial mRNA for putative
DE   alpha-2,8-sialyltransferase (Bfl-14) (siat8 gene), isolate Bfl-14
XX
KW   alpha-2,8-sialyltransferase (Bfl-14); siat8 gene.
XX
OS   Branchiostoma floridae (Florida lancelet)
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
XX
RN   [1]
RP   1-867
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (16-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite des Sciences et Technologies, UGSF, UMR CNRS
RL   8576, Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Petit D., Mollicone R., Delannoy P., Petit J.M.,
RA   Oriol R.;
RT   "Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene
RT   family: tandem duplications in early deuterostomes explain most of the
RT   diversity found in the vertebrate ST8Sia genes";
RL   BMC Evol. Biol. 8:258-258(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..867
FT                   /organism="Branchiostoma floridae"
FT                   /isolate="Bfl-14"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7739"
FT   CDS             <1..867
FT                   /codon_start=1
FT                   /gene="siat8"
FT                   /product="putative alpha-2,8-sialyltransferase (Bfl-14)"
FT                   /db_xref="GOA:B0BEZ3"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:B0BEZ3"
FT                   /protein_id="CAP16257.1"
FT                   /translation="IDVNLVFREKVKRFFDPTGNISLLKYQVKPGDRMWFLQSRIFSHS
FT                   SVTVSQSFHNMLPSRPPLENKHFRKCAVVGNSGILLHSGCGREIDTHDFVFRCNLPELE
FT                   GYEKDVGTKSNFTTMNPSVILTYYKDFVEPKLKERFINRLRRLEGGILFIPAFVATWEN
FT                   EHVQWTNDIIVEHNINVRTAYPSPDMEKWITGYWKSTEYRVARPSSGLWMYTFAVSLCD
FT                   EVHLYGMYPFDIDRRYGRNVNYHYYDPRPFATTHFGHDMPIEFQVFKSLHQKGALRLQT
FT                   DKCQSSG"
XX
SQ   Sequence 867 BP; 223 A; 222 C; 214 G; 208 T; 0 other;
     attgatgtta atcttgtctt cagggagaag gtgaagcggt tctttgaccc cacaggcaac        60
     atctcccttc tcaagtacca ggtgaagcca ggcgatcgca tgtggttcct acaaagccga       120
     attttctcgc actcgtcagt gacggtgtcc cagagcttcc acaacatgct gccctcccgg       180
     ccaccgctgg agaataaaca cttccgcaag tgtgcagtgg tgggtaactc aggaattctt       240
     ctccactccg ggtgcggtag ggagatcgac actcatgact ttgtgttccg gtgcaaccta       300
     cccgagctgg aaggctacga gaaagacgtg ggcaccaaat ccaacttcac caccatgaac       360
     ccctccgtga tattaactta ctacaaggac tttgtggagc cgaagctgaa ggaacgcttc       420
     atcaacagac tccgtcgttt agaaggagga attttgttca tacctgcttt tgttgcaacg       480
     tgggaaaacg aacatgtgca gtggacaaac gacatcatcg tagaacacaa tatcaacgtg       540
     cgaacagcgt acccaagtcc agacatggag aaatggataa cagggtactg gaagtctaca       600
     gagtacaggg ttgcccgccc ttcctctggc ttgtggatgt acacctttgc tgtcagtctg       660
     tgtgacgagg ttcacctcta tggcatgtac ccttttgata ttgacaggag gtatggtcgc       720
     aatgttaatt accattatta cgatccgcga ccattcgcca cgacgcactt cggtcacgac       780
     atgccgattg agtttcaagt cttcaagagc cttcatcaga agggggcgct acgtctccag       840
     acagacaagt gtcaatcatc gggatag                                           867
//
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