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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM901543; SV 1; linear; mRNA; STD; INV; 1134 BP.
XX
AC   AM901543;
XX
DT   16-JAN-2008 (Rel. 94, Created)
DT   08-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Branchiostoma floridae partial mRNA for putative
DE   alpha-2,8-sialyltransferase (siat8c gene), isolate Bfl-17
XX
KW   alpha-2,8-sialyltransferase; siat8c gene.
XX
OS   Branchiostoma floridae (Florida lancelet)
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
XX
RN   [1]
RP   1-1134
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (16-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite des Sciences et Technologies, UGSF, UMR CNRS
RL   8576, Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Petit D., Mollicone R., Delannoy P., Petit J.M.,
RA   Oriol R.;
RT   "Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene
RT   family: tandem duplications in early deuterostomes explain most of the
RT   diversity found in the vertebrate ST8Sia genes";
RL   BMC Evol. Biol. 8:258-258(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1134
FT                   /organism="Branchiostoma floridae"
FT                   /isolate="Bfl-17"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7739"
FT   CDS             <1..1134
FT                   /codon_start=1
FT                   /gene="siat8c"
FT                   /product="putative alpha-2,8-sialyltransferase"
FT                   /db_xref="GOA:B0BEZ2"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:B0BEZ2"
FT                   /protein_id="CAP16256.1"
FT                   /translation="SDDILTVQSAFNISDFGEDQGESLVANQNLSMYDGDPFDETVTSE
FT                   GLLVTKIPKQPPWALNMTEVAIAKRKGLRKYFNVVKRISLTKKDVQPGTIMHFDQSPEN
FT                   YVFSISPMLYDLLPERSPLQGMHHRKCAVIGNSGILLDSGCGNEINKADFVFRCNFAPT
FT                   QGYEKDVGTKTNFTTFNGSILQYRRFKYLATEKERQKFLKFVQALGDAIFWMPVFTYHT
FT                   NAIPVRILTDFFWENRNKTNVKLAWLGNALKWINGWYWRVKHQFKAYRLTSGVFMYTVA
FT                   QAICDEIHLYGFYPFHEDEEGQPIPYHYYEPKDVNQTYSKVHKMDAEHLVLRNLHTKGV
FT                   LKLTTKKCDPQGSWDIDKYEKVGPFPYRIPPKIRTNL"
XX
SQ   Sequence 1134 BP; 323 A; 303 C; 275 G; 233 T; 0 other;
     agtgatgaca tcctcacagt tcaatccgcc ttcaacatct cggacttcgg ggaagaccag        60
     ggcgagtcac ttgtggccaa tcagaacctg tcaatgtacg atggcgaccc ttttgatgag       120
     acagtgacca gtgagggtct gctggtcacc aaaatcccca aacagcctcc ctgggcactc       180
     aacatgacag aggtggccat cgcaaagagg aaaggtcttc ggaagtactt caatgtggtg       240
     aaaagaataa gtctgacaaa aaaggatgtc caaccgggta ccatcatgca ctttgaccag       300
     tctccggaga actacgtctt ctccatctcc ccgatgctgt atgacctctt accggagagg       360
     tcaccgctcc aaggcatgca ccatcggaaa tgcgctgtga tcgggaacag tggcatcctg       420
     ttggacagcg gctgtgggaa tgaaatcaac aaggcagact ttgtgttccg ctgcaacttt       480
     gcaccaacac aagggtatga gaaagatgtg ggcaccaaga ctaactttac taccttcaat       540
     ggcagcatcc tccagtacag gaggttcaag taccttgcca cagaaaagga gaggcagaag       600
     ttcctgaagt ttgttcaggc gctgggggat gccatcttct ggatgcctgt cttcacgtat       660
     cacaccaacg ccatccctgt acgcatcctc accgacttct tctgggagaa ccgcaacaag       720
     accaacgtca agttggcatg gctgggcaac gccctgaaat ggatcaatgg gtggtactgg       780
     agagtgaaac accagttcaa ggcctaccgc ctgacctccg gtgtgttcat gtacactgtg       840
     gcacaggcca tctgtgatga gatccacctc tacggcttct accccttcca tgaagatgag       900
     gaggggcaac ccatccccta ccactactac gaaccaaagg atgtcaacca gacctacagt       960
     aaggtccaca aaatggacgc cgaacacttg gtcctcagaa acctccatac taaaggtgtc      1020
     ctgaagctga caacgaaaaa gtgcgaccca cagggctcat gggatatcga caaatatgaa      1080
     aaagtggggc catttccgta tagaatacca ccaaagataa gaacaaacct atag            1134
//
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