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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AM901542; SV 1; linear; mRNA; STD; INV; 969 BP.
XX
AC   AM901542;
XX
DT   16-JAN-2008 (Rel. 94, Created)
DT   08-OCT-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Branchiostoma floridae partial mRNA for putative
DE   alpha-2,8-sialyltransferase (siat8c gene), isolate Bfl-12
XX
KW   alpha-2,8-sialyltransferase; siat8c gene.
XX
OS   Branchiostoma floridae (Florida lancelet)
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
XX
RN   [1]
RP   1-969
RA   Harduin-Lepers A.;
RT   ;
RL   Submitted (16-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Harduin-Lepers A., Universite des Sciences et Technologies, UGSF, UMR CNRS
RL   8576, Villeneuve d'Ascq, 59655, FRANCE.
XX
RN   [2]
RA   Harduin-Lepers A., Petit D., Mollicone R., Delannoy P., Petit J.M.,
RA   Oriol R.;
RT   "Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene
RT   family: tandem duplications in early deuterostomes explain most of the
RT   diversity found in the vertebrate ST8Sia genes";
RL   BMC Evol. Biol. 8:258-258(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..969
FT                   /organism="Branchiostoma floridae"
FT                   /isolate="Bfl-12"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7739"
FT   CDS             <1..969
FT                   /codon_start=1
FT                   /gene="siat8c"
FT                   /product="putative alpha-2,8-sialyltransferase"
FT                   /db_xref="GOA:B0BEZ1"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:B0BEZ1"
FT                   /protein_id="CAP16255.1"
FT                   /translation="SQFALGFMDPPLPPVSTISVPTVSTALDWTVNQTALNHHRADIEQ
FT                   FVDAERNISLVRSEVRVGQVMHFDYSEQKYVFPISASLYSLIPEVVPFQNKHYNACAVV
FT                   GSGGILSNSYCGNEIDEADFVFRCNFAPIDKYKSHVGSKTNFTTFNPSVLEKYFNNLQT
FT                   IYDRARFLNELRRLKGAVLWIPAFSFHGSNMVTRTLTDFFLEHERQFNPKLNLAWPGNV
FT                   MKYFSESFWKTKGLSPKRLSTGMIVYTLATMFCDEVRLYGFWPYSVAPDHTPLSYHYYD
FT                   KKGTTFTMKWKQAHQLPEEFTLLQHLHKQGVLKLTVTPCSS"
XX
SQ   Sequence 969 BP; 254 A; 281 C; 227 G; 207 T; 0 other;
     tcgcagtttg ccctagggtt catggacccg cccctccccc cggtgagtac catcagtgtc        60
     cccacagtca gcactgccct ggactggacg gtcaaccaga cggccttgaa ccatcacagg       120
     gcggatatcg aacaatttgt ggacgccgaa cgaaacatat ccctagtgag gtcagaggtc       180
     agggtgggtc aggtcatgca ctttgactac tcggagcaga agtacgtctt ccccatcagc       240
     gccagtctct actctcttat accggaggta gtaccatttc aaaacaaaca ctacaacgca       300
     tgcgcagtgg taggcagcgg cggcatcctt agcaacagct actgtgggaa cgagatcgac       360
     gaagcagact tcgttttccg ctgcaacttc gcaccaatcg acaagtacaa gtctcacgtc       420
     ggctccaaaa caaacttcac caccttcaac ccaagcgtct tagaaaaata cttcaacaac       480
     cttcagacta tctacgatcg ggcgagattc ttgaacgagc tgaggaggtt aaagggggct       540
     gtgctttgga ttcccgcctt ttctttccac gggtccaaca tggtcacgag aactttgacc       600
     gactttttcc tagaacacga gagacagttc aacccaaaac tcaacctggc ctggccagga       660
     aacgtcatga aatatttcag cgagagtttt tggaaaacga aaggtttgtc cccgaaaagg       720
     ctgagtacgg ggatgatagt gtacacgctg gccaccatgt tctgtgacga ggtccggctg       780
     tacggcttct ggccatactc tgttgcaccg gaccacacgc cactgtctta tcactactac       840
     gacaaaaaag gtacgacctt cacgatgaag tggaagcaag cccaccagct gcccgaggag       900
     tttaccctcc tccaacatct ccacaaacag ggagtcctca agctcacagt gacgccatgc       960
     tcctcctga                                                               969
//
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